| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2742 |
|---|
| Symbol | |
|---|
| ID | 5695598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3310039 |
|---|
| End bp | 3310704 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641265355 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_001530622 |
|---|
| Protein GI | 158522752 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGG AAAACGAAGA AATAAGATAT GTGCGCCGGC GCAAACAGAT GGTGGAAAAC
CAGATCGCGC GGCGCGGCAT CAACGACCCT TTTGTGCTGG GCGCCATGGG CACGGTGCCC
AGGCACCTGT TTGTCAGCGA GGCCCTGATG GACCAGGCCT ACGGCGATTT TCCCCTTCCC
ATCGGTGAGC AGCAGACCAT CTCCCAGCCC TATATCGTGG CGGAAATGAC CCAGGCACTG
GAACCCACCG GTAACGATCG GGTTCTGGAG ATCGGCACGG GATCGGGATA TCAGGCGGCC
ATACTCTCCC GCATCGTGTC CCGCGTTTAT ACCGTTGAGC GGATACACTC CCTTTACATT
CGGGCAAGGG CCCTGTTTGA CAGGCTGGGT TACTACAACA TCGCCACCCG GTACTCCGAC
GGCACCACCG GGTGGAAGGC GGAAAGCCCT TTTGACCGGA TTATCATCAC CGCCGGTGCC
CCGGACATTC CTTCGGTGCT GGTGGATCAA CTGGCTGTGG GCGGGCGGCT GGTAGCGCCG
GTGGGAACCG AGTCCGTGCA GAGCCTGATC AAGCTGGTCA AGGAAAAAAC CGGGGTTCGG
TCCACCGATC TGGGCGGGTG CCGGTTTGTC AAGCTAATCG GCGAACATGG GTGGAAAGAA
AATTAG
|
|---|
| Protein sequence | MVMENEEIRY VRRRKQMVEN QIARRGINDP FVLGAMGTVP RHLFVSEALM DQAYGDFPLP
IGEQQTISQP YIVAEMTQAL EPTGNDRVLE IGTGSGYQAA ILSRIVSRVY TVERIHSLYI
RARALFDRLG YYNIATRYSD GTTGWKAESP FDRIIITAGA PDIPSVLVDQ LAVGGRLVAP
VGTESVQSLI KLVKEKTGVR STDLGGCRFV KLIGEHGWKE N
|
|---|
| |