| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2738 |
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| Symbol | |
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| ID | 5695594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3305237 |
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| End bp | 3307486 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265351 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001530618 |
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| Protein GI | 158522748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.789248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA AATTTTTCAA AGCGTTCCGG ACCTTCATGT CCGGACTGGA TGAGGAAGAA
CGCCGGCGCA GAAAGCGGGA AGGCATTCTG GCTGTTGTGC TGCTGGTGAC AGTGGCCGTG
CTTACCTACC TGGAAAGCCG CATCATCCAG TTCGGCGCCG ACATTCCGAT TTCCAACACG
GTGTTGATGT TCGTCTTCAT CAACATCAAC CTGCTGCTGC TGATCCTGCT GATTTTTCTT
GTTTTCAGGA ACCTGGTCAA ACTTTTCTAC GACCGCAAGC AGAATGTCAT GGGCGCCCGG
CTGCGGACCC GGCTGGTGGT GGCGTTCATC TCCCTGACCC TGGTCCCCGC CATTGTGCTG
TTCTTTTTTT CCATGAGCTT TATCACCACC AGTATCAAGT TCTGGTTCAA CGTGCCCGTG
GACCATGCCC TGGAGAACTC CCTGGCCGTG GGCAAGAACA TGTATGCCCA CATTGAGGAC
AGCAACCGAT TTTTTCTGAA ACGGGCCGCC TACCAGATCA CCACCAACAA TCTGCTGCGG
CCCTATCGCA CCGACGATCT CTCCCGGTAT ATCCAGATCG TTCAGCGGGA GTTTCACCTG
AACACGGTGG AGGTCTACAA TCCCGACGGG GAACGGATCA CCTATGCCGT CTCTCCGGAA
ATTGAGACGG CCCCTTTCGG AACCTTATCA ATAAACGATC TGCAAAAAAC CGGCATGGAA
ACAGACACGG TTTTTTCCAT CAGCCGGGAT CTGCCCGCCG GTGAGCTGGT CAGCTCCATC
TGCTCGATAC CCTTTGGCCA GCCGAGGGAA AAGGCCGAAG CCTTTCTGGT GATCTCCATC
CTGCTGCCCC CGGACCTGTC CGACAGCCTG ACCGCCATTT CCAGGGGCAT TGAAGAGTAC
CAGCAGATCA AGCTTCTCAA GGAGCCCATT CAGAGCACCT ATTACATCGT TCTCTCCATC
GTGGCGCTGC TGGTGGTCTT CTGTGCCGTG TGGTTCGGCT TTTACATCGC CAAGTCCCTC
ACCAATCCCA TCATGGAGCT GGCCAAGGGC CTGGAGCGGG TCTCCGCCGG AGACCTGGCC
TATACCATCG AACGCCTGGC CGATGATGAA ATCGGCATGC TGGTCAGCTC GTTTAACAAA
ATGACCGGGG ACCTGCGGGC CGGGCGGCAG CAGATCGAAG CGGCCACCCA GGCGCTGGAA
CGGCAGAAGG ACGCGCTGGA AGAGAGCCGC CTCTATATGG AGATCGTTCT CAACAACATC
TCCACCGGCG TCATCTCCAT TGATGCCCAC GGCACCATTA CAACGATCAA CAAGTCGGCC
CGGAAAATGC TGTCCCTTTC CCACGAAAAC GTGCTCAACC GTTACTATGC CAACGTATTG
AAGGACCGGT ACCTGAAACT TGCCGATGAG CGAATCGCCA CCATTCGGGA CGGCGGCCAG
GACATGGTGG AACTGCCGCT GCGACTCACC ATCAGCGGTA CGCCCCGCAG CTTTATTATC
TACTTAAACG CCCTGCGGCA CGACAAGACC GGCCAGTACA TGGGCATCGT GATGGTAATC
GACGACCTCA CCGAACTGGA AAAGGCACAG CGCATGGCGG CCTGGCGGGA GGTGGCCCGT
CGCATCGCCC ATGAGGTAAA AAACCCGCTG ACCCCCATCT CCCTTTCGGC CCAGCGCCTG
AAAAGAAAGT TCGGGCCCGA CGCCGATGAC CCGATCTTTG AAGAATGTAT TCGCACCATT
CTTGATTACG TGGATATCAT TCGCAACCTG GTCAACGAGT TTGCCGCCTT TGCCAAGTTT
CCATCGGCCA AGCTGGGGCC CTGCGACCTG GTGCAGACCA TTCGGGAAAC CGCCGACCTC
TATACCGAGG AAGACAGCCC CGTCACATTC ACCATTGACG CGCCCCCGGA CCTGCCCCGG
CTGAACCTGG ACCGGCAGCA GATCAAACAG GCCCTGATCA ACCTGATTGA AAACGCGATC
ACCGCCATGG AGGGGGCCGG GCGGATCACG ATCACGGTGC GCCACGATCC CGCGGCCATG
AAGGTGGTGC TGACCTTTGC CGATACCGGC AGAGGGCTTT CCGAGGCGGC GAAAAACAAC
CTTTTTGAAC CCTATTTTTC AACCAAAAAA TCGGGAATGG GGCTGGGCCT TGCCATTGTC
AGCTCCATTA TCGCGGACCA CAACGGCACC ATCAGCGCCC ATGACAATAA GCCCAGAGGC
GCTCGGTTTA TCATCGAGCT GCCGGCATGA
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| Protein sequence | MIKKFFKAFR TFMSGLDEEE RRRRKREGIL AVVLLVTVAV LTYLESRIIQ FGADIPISNT
VLMFVFININ LLLLILLIFL VFRNLVKLFY DRKQNVMGAR LRTRLVVAFI SLTLVPAIVL
FFFSMSFITT SIKFWFNVPV DHALENSLAV GKNMYAHIED SNRFFLKRAA YQITTNNLLR
PYRTDDLSRY IQIVQREFHL NTVEVYNPDG ERITYAVSPE IETAPFGTLS INDLQKTGME
TDTVFSISRD LPAGELVSSI CSIPFGQPRE KAEAFLVISI LLPPDLSDSL TAISRGIEEY
QQIKLLKEPI QSTYYIVLSI VALLVVFCAV WFGFYIAKSL TNPIMELAKG LERVSAGDLA
YTIERLADDE IGMLVSSFNK MTGDLRAGRQ QIEAATQALE RQKDALEESR LYMEIVLNNI
STGVISIDAH GTITTINKSA RKMLSLSHEN VLNRYYANVL KDRYLKLADE RIATIRDGGQ
DMVELPLRLT ISGTPRSFII YLNALRHDKT GQYMGIVMVI DDLTELEKAQ RMAAWREVAR
RIAHEVKNPL TPISLSAQRL KRKFGPDADD PIFEECIRTI LDYVDIIRNL VNEFAAFAKF
PSAKLGPCDL VQTIRETADL YTEEDSPVTF TIDAPPDLPR LNLDRQQIKQ ALINLIENAI
TAMEGAGRIT ITVRHDPAAM KVVLTFADTG RGLSEAAKNN LFEPYFSTKK SGMGLGLAIV
SSIIADHNGT ISAHDNKPRG ARFIIELPA
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