Gene Dole_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2716 
Symbol 
ID5695571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp3275210 
End bp3275848 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID641265328 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530596 
Protein GI158522726 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.448471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGG AACTTAAAGA AAGAGAAAAA CTGGCCCGGC AACAGCTGAT TGTTGAGGTT 
GCTGAAAAAC TTTTTCATAA AGAAGGATAC GATTCAGTGA CCATCCGCCG GGTGGCGGAA 
ACCATTGATG TGTCCCCCGG CACCATTTAT ACCTACTTCA AAAGCAAGGA AGAATTGATT 
GTCTGCGTGT TGATTCACAA CATGAAGCTT CTGGAAGAAG AAATCACGAA AAGCCTGAAA 
ATCAATGATC CAATAAAAGC CCTAATGGCC ATTGCAGATG ATTATAAGGC CTACTATTCC 
CGGTTCGGCC GGTACGTTAA CGTGATGGAC CTGCTGACCA CCGACGAAAA CGGATACGCG 
CTGGTTTCAA AAGAGCTTCG CAATGGACTG GGTGCTGTCG TGGAGCGTAT TCTCGAAGGC 
ATTGCGGAAA GAATGAACCG GGATAATGCA TCCAGAAAGC TCTTAAAGGG CATTCCCCCT 
AAAAGGGTTA CCGCCGCCAT GTGGGCCGTG GCCCATGGAA TTTCTTATAT CGCTCTGCCC 
CTTTCAACCC AGCCCGACCG AGGCTGGTTC GACTTTGATC AGGTACTGCC TGACGTGATA 
CACTTGCTGC TGACGGACAC AACAGCGAAA CCCAAATAA
 
Protein sequence
MFKELKEREK LARQQLIVEV AEKLFHKEGY DSVTIRRVAE TIDVSPGTIY TYFKSKEELI 
VCVLIHNMKL LEEEITKSLK INDPIKALMA IADDYKAYYS RFGRYVNVMD LLTTDENGYA 
LVSKELRNGL GAVVERILEG IAERMNRDNA SRKLLKGIPP KRVTAAMWAV AHGISYIALP 
LSTQPDRGWF DFDQVLPDVI HLLLTDTTAK PK