| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2715 |
|---|
| Symbol | |
|---|
| ID | 5695570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3273376 |
|---|
| End bp | 3274812 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641265327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530595 |
|---|
| Protein GI | 158522725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000041163 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAC GAATAGAAAA TGAAGGTCTT TACAACACAA TTAAGTTGTT TTTTGAGAAG
TGTCTACTGG AGGATAAATC TCTCTTATGG CCTGATCAAA ACTATTGGAC TTTGGATAAT
GTGAAGTCAT TAAAACGGCG CCTGATTGAT TCCCCGTTAC TTGGAAAGAC TCTTGCCTTT
GAAGAGAAGC TTGAAAAGCA AATGGATGGT GCGTCTCCTT CTGAATGGGC GATTATTTGT
GACATCTATT TTGTTTATTT CCTTCCCTCC ATAAATATTA CTCTGGATAA AATACGCAAA
GATATAAGCT GGGCTGCATC ACACGCAAGG GTTACCCCTC CGGTAGAATC AGACCCCATT
TGGCAGGTAC AACGCCATGG TTTTTCACGC ACTGCATTTA AGTACCATAC TAAATATAGC
CAGTTCTGGT TTATTGTTCT TTTTACTCTG CATATTAAAG AACAAGAATC AGCCCAGAGT
ATCATTTCAG ATCATACTGC AATGAAAAAT GCTATGGATA TGGTATTGGA AAATATAGAA
CTCTGCAATG ACCGAGGATA TGATATGCGT CACGCCATAC TTTATATGGC GTTTCCAGAC
TACTATGAGA GGATTATCAG TACAAGAGAC AAGAAATGGA TCGTTGATGC CTATCGAAAG
AAAGTTGCCC TCCCGGTCCC TGCCGATTTA GATGACGCCA TACTTTTGAT TCGCAATGCT
TTGAAGAAAG AGTACGACAA ATCAGATCGC CAGTTTGATT TTTATACGGA CCTTAAAGAT
GGATGGCGAC CAAATACATC CGCATCGAAG GTGGACATTA CTGTTGATAC TGATAAAGGA
CCAGTAACCG TTCCACCTCC TGAGCCGGAG TCAGACACTG CAACAGATAC AAAAAAAGAA
CACACCGAAC ATACAGAAAT TCAGTGGATG CTGCTTAATC TTGGCAATGA TATGGGGCTT
GATCTTTGGG TGGCAAACAA TGATCGCAAT AAAGAGATCA ATAACCAGCG CCTGGGGGAC
CTCCCGAGAG TAAAAAAATC CCTCCCCTTA ACCTTCGATG AAGCGACCAA CAAAACAATT
CAGCTTATAG ATGTGTTGTG GTTGAAACAG AACACTATTC TGGCGGCATT TGAGATTGAA
AGTACAACTT CAATTTATTC TGGTATCCTC AGAATGGCTG ATTTAATCGC AATGCAACCC
CATATTAATA TTCCGCTTTA CATAGTGGCC CCAGATGAGC GACGTGAGAA AGTATATGCT
GAAGTGAACC GTCCTGTTTT TTCCAGCCTG TCTACCCCGA TGAACCAGAT ATGTAAATAC
ATTCCTTTCT CAGGGCTGAG AAGCACCATC AAAAATACTG CTTCGATGAC CAAGTACCTG
AAGCCAGAAT TTCTTGATGA AATTGCGGAA GATTGTGAAG TTGATCAGAA TGAATAA
|
|---|
| Protein sequence | MARRIENEGL YNTIKLFFEK CLLEDKSLLW PDQNYWTLDN VKSLKRRLID SPLLGKTLAF
EEKLEKQMDG ASPSEWAIIC DIYFVYFLPS INITLDKIRK DISWAASHAR VTPPVESDPI
WQVQRHGFSR TAFKYHTKYS QFWFIVLFTL HIKEQESAQS IISDHTAMKN AMDMVLENIE
LCNDRGYDMR HAILYMAFPD YYERIISTRD KKWIVDAYRK KVALPVPADL DDAILLIRNA
LKKEYDKSDR QFDFYTDLKD GWRPNTSASK VDITVDTDKG PVTVPPPEPE SDTATDTKKE
HTEHTEIQWM LLNLGNDMGL DLWVANNDRN KEINNQRLGD LPRVKKSLPL TFDEATNKTI
QLIDVLWLKQ NTILAAFEIE STTSIYSGIL RMADLIAMQP HINIPLYIVA PDERREKVYA
EVNRPVFSSL STPMNQICKY IPFSGLRSTI KNTASMTKYL KPEFLDEIAE DCEVDQNE
|
|---|
| |