Gene Dole_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2709 
Symbol 
ID5695564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3267778 
End bp3268410 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content43% 
IMG OID641265321 
Productintegrase family protein 
Protein accessionYP_001530589 
Protein GI158522719 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000251547 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGCA TGGTTATTAT GAATTTGAGA GCTATTATGG ACATAAAGTA TTTCACAGAA 
GCCCAGGTTA GGCTGTTGAG GCGAACCGTC AAAGATAAGG CTGTTGCCGA TCAGAGCAAA 
AAAAATAAAA CCGGTATCCG AGAATGGATG GTAATTGACC TTATAACCAG TACCGGCTTA 
AGGGTTGAAG AAGTATCCAA TCTCCGTTGT GGGGATCTAA AGGCTGGTTA CGGGCAATGT 
GAAGTCTTTG TGAGTCGAGG GAAGGGTGGG CGTTCAAGAA CGGTTGAAAT CCCCCAATCC 
CTCAAAACAC ACCTCAACCA GTACTTAAAA TGGAAAAAGG AGCAACAAGA AAGGATAGGC 
CCAAGCAACT ATTTATTTGT TGGCCAGAGA GGGCCTTGGA CTGCTCAGGC AATTCAGCAG 
CTTGTTAAAA AGTATCTAAA GAAGCTTGGT TTGTATGAAA GGGGCAAAAG TGTGCATGCT 
TTAAGACACA GTTATGCTGT TCAGCTCTAT CGAAAGAAAC GTGATTTGAG AGCAGTTCAG 
AAACAACTTG GGCATGCATC GATACAAACA ACACAGATAT ACGCAGATGT TACAAAGGAG 
GATATTCAGC AGCAAATAAA CGGGTTGTGG TAA
 
Protein sequence
MHRMVIMNLR AIMDIKYFTE AQVRLLRRTV KDKAVADQSK KNKTGIREWM VIDLITSTGL 
RVEEVSNLRC GDLKAGYGQC EVFVSRGKGG RSRTVEIPQS LKTHLNQYLK WKKEQQERIG 
PSNYLFVGQR GPWTAQAIQQ LVKKYLKKLG LYERGKSVHA LRHSYAVQLY RKKRDLRAVQ 
KQLGHASIQT TQIYADVTKE DIQQQINGLW