| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2685 |
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| Symbol | |
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| ID | 5695536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3228750 |
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| End bp | 3229913 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265293 |
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| Product | TraB family protein |
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| Protein accession | YP_001530565 |
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| Protein GI | 158522695 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTG ACGACAACAT TCATCACCTG CATGCAGGTG ACAAAGAGAT CCTTCTGGTG
GGCACCGCCC ATGTCTCCCG CCAGAGCGCC GAACAGGTCA CTCAGGTGAT TGAGGCAGAG
CAGCCGGACA CGGTGTGCGT GGAGCTTTGC CGGCCCAGGT TTGAGGCTGT CCGCAACCGG
GAGCACTGGC GACAGATGGA CATCCTGAAG GTGGTCCGGG ACAAGAAGGC CTTTATGCTG
CTGGCCAACC TGCTGCTGGC CGCCTTTCAG AAAAAGATCG CGGAAAAGTT CGGCATTGCG
CCGGGCCAGG ACATGATCAG TGCTATTGAA ACCGCGGAAA AAATCGGGGC AAAGATCCAC
CTGGCCGACC GGGAAATCCG CGCCACCCTT GCCCGGGCCT GGCGTTCCAT GGGGCTCTGG
GGAAAAAGCA AGCTCCTGTT CCAACTGGTG GGCTCCCTTG CAGGTGCCGA TGAAATCTCT
GAAGAGGAGA TCGAAAAGCT CAAGCAGGAG GACATGCTGC ACATGGTGCT GGCCGAGCTG
GAGGCATCCC ACCCCATGCT GCGAAAAATC ATCATCGATG AACGGGACCA GTACCTGGCC
CACTCCATTT ACAACGCCCC CGGAAAAAAG ATCGTGGCTG TGGTGGGTGC GGGCCATGTA
GCCGGCATCA AACGGTACTG GAACACGGCC ATCGATATTC AGGCGCTGGA GACCGTTCCA
CCGCCCGGTA TATCCGGGAA AGTGATAAAG TGGGGTATTC CCGCCCTTAT CATCGCGGTG
TTTGTGCTGG GGTTTGCCCT GGGCGGCAGG GATACCGGCA TGCACCTTCT GGGGCTCTGG
ATTCTTGCCA ACAGCACCCT GGCCGGCCTG GGCGCCCTGG CCGCATGGGG CCATCCGCTC
ACCATCCTGG CGGCCGCGGT ATCGGCCCCC ATCACATCGG TCAACCCCGC CATTGGCGCC
GGATGGGTGG CCGGGCTGGT GGAAGCCCTG GTGCGGCGGC CCACCGTGGG AGACCTGGAA
GACCTCTCTT CCGATATCAC CTCCTTTGGC GGTTTCTGGC GCAACCGGGT CACCCGGGTG
CTGCTGGTTG TGGTGCTGGT CAATCTGGGC AGCACGCTGG GCACCTTTGG TGCCCTGCCC
CTGATGGCCC GGCTGTTCCA CTGA
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| Protein sequence | MTSDDNIHHL HAGDKEILLV GTAHVSRQSA EQVTQVIEAE QPDTVCVELC RPRFEAVRNR
EHWRQMDILK VVRDKKAFML LANLLLAAFQ KKIAEKFGIA PGQDMISAIE TAEKIGAKIH
LADREIRATL ARAWRSMGLW GKSKLLFQLV GSLAGADEIS EEEIEKLKQE DMLHMVLAEL
EASHPMLRKI IIDERDQYLA HSIYNAPGKK IVAVVGAGHV AGIKRYWNTA IDIQALETVP
PPGISGKVIK WGIPALIIAV FVLGFALGGR DTGMHLLGLW ILANSTLAGL GALAAWGHPL
TILAAAVSAP ITSVNPAIGA GWVAGLVEAL VRRPTVGDLE DLSSDITSFG GFWRNRVTRV
LLVVVLVNLG STLGTFGALP LMARLFH
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