Gene Dole_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2676 
Symbol 
ID5695527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3218034 
End bp3219197 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content59% 
IMG OID641265284 
Productmajor facilitator transporter 
Protein accessionYP_001530556 
Protein GI158522686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGAAA AAGAGACCCC ATCCAGCCGC ATCAGCCTCG CGCTGCAATA CTTTCTCTAC 
TTTGCCGTGC TGGGCATCTT TCTGCCCTTT TTCAACCTCT ACTGCTACCA CCTGGGCTTT
TCCGGTTTTC AGATCGGCAC CCTGTCCGCC ATCCAGACCG GCGCCACCGT TGTTTTTCCC
CTGATCTGGG GGGCCCTGGC CGACCGGTTT GAGGCCCGCA AGCCGATCTA CCTTTTGTGC
AACATGGTCA GTGCCGGCTT GTGGAGCTTT TTTCTGTTTA CCACCGATTT TATTCCCATG
CTGGTGATTA CCCTGTTTTA CAGCATTTTT CGCGCTCCGG TGATCTCCTT TATGGAGGCT
TTTTCCATGG ACATACTGGG CGCGGAAAAA AACAGCTACG GCCGGGTCCG GGCCTGGGGC
ACGGCCAGCT TTATCGCGGT GGTCATCCTC ATGGGCCGGG TCACCGACAT CTTTTCCATT
GACATCATCA TTCCCCTGAT TCTGGCCGGC ACCCTGCTCC AGTCCGCCGG TGCGCTGGCC
CTGCCCGCGG TGAAAAGCAC GCGGGAGAAA AGCGGGGCCG GCTCCCTGCT GCGGCAGAAA
CGGGTCAAAA TGTTCCTGGC CTGCGCTTTT CTGATGCTGG TCAGCCACGG CACCTACTAC
GGCTTTTTCT CTATTCACCT GGAGAACCTG GGGTTTGACG CCACTTTCAT CGGGTTTGCC
TGGGCACTGG CATCCCTGGC CGAAATCGTG GTCATGCTGG CCTCGCCCAG GCTCTTTGCC
CGTTTCTCCC TGGAGGCGGT ACTGATCTTC TCTTTTTTTG TGGCCGTTGT CCGCTGGCTG
CTGATGGCCG TTGTCATATC GGCCCCGCTG ATTCTCCTGG GTCAGCTGCT GCACGCCGCC
ACCTATGCCG CCTTTCACAT GGCCAGTATT CTTTACATGG ACCGGGTAAG CCTGGAAGGC
ACCAAAACCC TGGGCCAGGC CGTAAACAAC GCGGTGAGCT TCGGCCTTGG CATGATGATC
GGTATTTTTG TCAACGGTGT TTTTTTCGAC GCTACGGGAG CGCGCCCCCT GTTCATCGCC
AGCGCGGTAA CGGCCCTGGC CGGTGGCCTG GCCATGATGG CCACAACTCG CCTGGCCGCG
CGCAAGGACA GGGCCGTTGC CTGA
 
Protein sequence
MVEKETPSSR ISLALQYFLY FAVLGIFLPF FNLYCYHLGF SGFQIGTLSA IQTGATVVFP 
LIWGALADRF EARKPIYLLC NMVSAGLWSF FLFTTDFIPM LVITLFYSIF RAPVISFMEA
FSMDILGAEK NSYGRVRAWG TASFIAVVIL MGRVTDIFSI DIIIPLILAG TLLQSAGALA
LPAVKSTREK SGAGSLLRQK RVKMFLACAF LMLVSHGTYY GFFSIHLENL GFDATFIGFA
WALASLAEIV VMLASPRLFA RFSLEAVLIF SFFVAVVRWL LMAVVISAPL ILLGQLLHAA
TYAAFHMASI LYMDRVSLEG TKTLGQAVNN AVSFGLGMMI GIFVNGVFFD ATGARPLFIA
SAVTALAGGL AMMATTRLAA RKDRAVA