Gene Dole_2673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2673 
Symbol 
ID5695524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3214361 
End bp3216571 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content62% 
IMG OID641265281 
ProductRecD/TraA family helicase 
Protein accessionYP_001530553 
Protein GI158522683 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGC TTCAAGGGGT CCTGGAGACC ATTCGATATC GCCATCCTTC CACTTTTTAC 
ACCATTGCCG GTCTGCGTGT GGCCCGGCCC GGCACCCTTG TCACGGTGGT GGGCATCCTG
CCCGGCGTGA CGCCGGGGCA GACCGTTACC CTCACCGGCG AATGGACTAC CCATGCCCGG
TACGGCCAGC AGTTTTCCGT GAAAACCTGT GACGTCACCC TTCCCGCCAC GGTGGAAGGT
ATTCAGAACT ACCTGCAATC CGGCCTGGTC CAGGGCGTTG GAACCGCCAT GGCCAGAAAG
ATCACCCGCC ATTTCGGCAA AGAGACATTT TCCGTGATTG AAAACCAGCC TGAGCGGCTG
GCCGAAGTGC CGGGCATCGG CGCAGCAACA GCGCTCATGA TCCGGAATGC CTGGCGCGAG
CACCATGCTG TCAGGGAGTT GATGGTGTTT TTGCAGGAAA AAGGGGTGGA TGCCTCCCTC
AGCGCCCGGA TTTTCCGGGC GTATGGAGAG GCGGCGGTGG ATATCCTGCG GGCCGACCCC
TTTCGCCTGG CCGAGGACCT GCCGGGCCCC GGGTTTGTGA TCGCCGACAC CATCGCCCTT
TCTTCAGGTG CCAGGGCCGA CGACCCCCGG CGGATAAGGG CCTGCGTGCG CCACACCCTG
GACCAGAACA GAACGGCAGG CAACGTGTTT GCCTTTGTTT CCCACCTGGT GGACCATTGC
GGCACGCAGT TTCACATTGA CCCAGCGGAT GTGGAGACCG CCCTTTTCGA GCTGGCCCGG
GCCGAGGAAC TGGTGATAAC CGAGATGCCC GGCCCGGACC CGGATGTGGC CATTGTTTAT
CCGGCGGACC TGTACGCCGC TGAAACCGGC ATCGCGGCCC GGCTGGCCGC GTTTGCCTCG
GTCCCTGTCA CCACGGACCG GGCCGACAGC GACCAGATCA TGGACCAGGT GGTGCGGCAG
TTGGCCATTC AGCCCTCTGT CGAACAGCTG GCGGTGATTC AAAACATTCT TTCCCACCGG
GTGGTGGTGG TGACCGGAGG GCCGGGCACG GGCAAGACCA CCCTGATCCG GGCCATTGCC
GCGGTGTTCG AGGGTGCCGG TAAAAAAGTG ATGCTGGCCG CGCCCACGGG CCGGGCCGCC
AAACGTCTCT GCGAAGTGTC CGGCAAGGAG GCGGTCACCC TTCACCGGCT GCTGGGCATC
GGGTTTGAGG AAACCCCTTT TCTGAAAAAT CAGGACAACC AGCTTCGCGC CGACGTGATC
GTGGTGGACG AGGCCTCCAT GGTGGACATT CCGCTTTTTT TTGCCCTGCT GTCCGCCACT
CCGGTAACCG CCGGGCTGGT GCTGGTGGGG GATGTCTATC AGCTGCCGTC GGTGGGCCCG
GGCAACGTGC TGCGGGATCT GATTGCATCC GGCAGCCTGC CGGTGTTTGA GCTGACCCAG
GTGTTCCGCC AGGCTGAACA GAGCGCCATT GTGCGGAACG CCCACCGCAT TCGCCGGAGC
GAGCCGCCGG ACCTGGCGTC CGCCGCTGCC ATCTCCCCGG ATACCGGCTT CTGGTTTGTA
GAAAAAGAAA CTCAGGAAGA AATCGCCGCC ACGATAAAAG ACCTGTGTGT TTCCCGGTTG
CCGCGAACCT TTGGCCTGGA CCCGGCAAAC GATATTCAGG TACTCACCCC CATGCACAAG
GGCCCGCTGG GCACCATCGC TTTGAACCAT GCACTCCAGC AGGCATTAAA CCCGGATGGC
CCCGGGAATA AAGAGACACT GGCCGGTTTC AGGCCCGGCG ACAAGGTGAT GCACCTGAGA
AACAACTACA CCAAGGAGGT GTTCAACGGC GACATCGGTA CTGTGGCGGC TGTGGACACA
CGGCGGCGCA TGATTGATGT GAACTATGAC GGCCGCATCG TCGAATATGA TGTGGTCGAA
GCCGATGAGC TGACCCTGGC CTATGCGATC ACGGTGCACA AGTCCCAGGG ATCGGAGTAC
CCGGCGGTGG TGCTGCCCAT GACCACCCGG CATTACACCA TGCTGGAGCG TAACCTTTTT
TATACCGCCA TGACCCGGGC ACGGCAACTG GTGGTGCTGG TGGGGACATC AAAAGCAGTG
GCAGTGGCCA TGCGGAAAAA CACCCCGAAA ACCCGGCTGT CGCTTCTGGC CGCCCGCCTC
AACCCGGCCA TCATCGACGA GGAACGGTTT GCGCAGGACG ATATGACCTG A
 
Protein sequence
MITLQGVLET IRYRHPSTFY TIAGLRVARP GTLVTVVGIL PGVTPGQTVT LTGEWTTHAR 
YGQQFSVKTC DVTLPATVEG IQNYLQSGLV QGVGTAMARK ITRHFGKETF SVIENQPERL
AEVPGIGAAT ALMIRNAWRE HHAVRELMVF LQEKGVDASL SARIFRAYGE AAVDILRADP
FRLAEDLPGP GFVIADTIAL SSGARADDPR RIRACVRHTL DQNRTAGNVF AFVSHLVDHC
GTQFHIDPAD VETALFELAR AEELVITEMP GPDPDVAIVY PADLYAAETG IAARLAAFAS
VPVTTDRADS DQIMDQVVRQ LAIQPSVEQL AVIQNILSHR VVVVTGGPGT GKTTLIRAIA
AVFEGAGKKV MLAAPTGRAA KRLCEVSGKE AVTLHRLLGI GFEETPFLKN QDNQLRADVI
VVDEASMVDI PLFFALLSAT PVTAGLVLVG DVYQLPSVGP GNVLRDLIAS GSLPVFELTQ
VFRQAEQSAI VRNAHRIRRS EPPDLASAAA ISPDTGFWFV EKETQEEIAA TIKDLCVSRL
PRTFGLDPAN DIQVLTPMHK GPLGTIALNH ALQQALNPDG PGNKETLAGF RPGDKVMHLR
NNYTKEVFNG DIGTVAAVDT RRRMIDVNYD GRIVEYDVVE ADELTLAYAI TVHKSQGSEY
PAVVLPMTTR HYTMLERNLF YTAMTRARQL VVLVGTSKAV AVAMRKNTPK TRLSLLAARL
NPAIIDEERF AQDDMT