| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2668 |
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| Symbol | |
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| ID | 5695519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3209130 |
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| End bp | 3209750 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641265276 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530548 |
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| Protein GI | 158522678 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000911518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT CCATTAATGC CGACGCCTAT TTGGAGCAAC ACAAAAACGC CGTGCAGGCC
AACCCCACCT GCGGCATGAC CCGCTATAAC TACGCGGTGG CCCTGCTGGC CCAGAAACGG
TTTGACGAGG CCGAACACGA GCTCAAGGAG GCGGTCGATT GCAGCCCCAC CTTTTCCGAG
GCCTATGTAC TGCTGGGTGG CATTCGCATG CACCACAACG ATTTGGAAGG CTGCCTGCTT
TACAATCAGA AAGCGGTCAA CGCCAGAGAG GGGTTTTCCG AGGGCTACGG CAATATCGGG
TTTGTTCATC TTCAGCAGGG CAACATTGAG GCGGCCATCG AGGCCCTTGA AAAAGCGGTG
GCCCTCAACC CCAACTTCAT TCAGGCTTAT GCCAACCTGG GCAATGCCTA CCTGATACAC
GGGCAGGTCG ACAAAAGCAT CGAGGCCAGC AAGAAGGCCC TAGAAATTGA GTCGGCTTTT
GCCGTGGCCC ATAACAACCT GGCCATCGCC TACCTGGAAA AGGGTGAAAT TGAACTGGCC
GCGACCCATT GCGAAAAGGC CGAAAAGCTG GGATACGCCG TGGCTCCGGA AATTAAAAAG
GAAATTGACA CCGCTGGATA G
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| Protein sequence | MTQSINADAY LEQHKNAVQA NPTCGMTRYN YAVALLAQKR FDEAEHELKE AVDCSPTFSE
AYVLLGGIRM HHNDLEGCLL YNQKAVNARE GFSEGYGNIG FVHLQQGNIE AAIEALEKAV
ALNPNFIQAY ANLGNAYLIH GQVDKSIEAS KKALEIESAF AVAHNNLAIA YLEKGEIELA
ATHCEKAEKL GYAVAPEIKK EIDTAG
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