| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2624 |
|---|
| Symbol | |
|---|
| ID | 5695475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3166404 |
|---|
| End bp | 3167186 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641265232 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001530504 |
|---|
| Protein GI | 158522634 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAAA AATTCATGAA ATATGCGGGA TATGCCGGAA TCACCATTAT ACTGGTGCGG
CCCCGCATTC CCGAAAACAT CGGTGCCTGC TGCCGGGCCA TGAAAAACAT GGGGCTTTCC
CGGCTGAAGG TGGTGGCCCC GGAAGCATGG GACCCGGTCC GGATCATGAA AACCGCCACC
CACGCCTGCC GGGACGTGGT GGAAAAGATC GAGATTGTCG GCGACACGGC CACGGCGGTG
TCGCCTTTTT CTTACATTGC CGGCACCACC GCCCGCATGG GCCGGCAGCG GCAGATGGTG
CTTTCGCCCG GGGGCTTCGC TGAAAAAGCG GTTACCCTGT GCCGGGAGAA CCCGGTGGCT
GTGATGTTCG GGCCCGAGGA CCGGGGCCTT GAAAACGAAG ACCTTCAGTA CTGCCACAAC
CTTGTCCATA TTCCCACATC CGAATTTTCC TCCCTCAACC TGGCCCAGGC GGTTTTAGTG
ATCTGTTACG AGCTGTTCGG CGCGGCCCGG CCGAACCAGG ACCATTTTCA GCCCCGGCTT
GCCTCAAGCT TTGAGCTGGA GGGCATGTAC GACCAGATGA AGGAGGTGCT GCTGGCCATC
GATTTTCTGC GGCCGGACAA CCCCGATTAC TGGATGAACA ATTTTCGCCG GTTTGTTTCC
CGGGTGGGCC TGACGGCAAA AGAGGTCAAG CTGATCCGGG GGGTGTGCCG CCAGGTGAAC
TGGTACGGTG AAAAGCGGTA TGCTGACGGC CTGGCTGAAA AGAAAAAGAA AGATCCCCGG
TAG
|
|---|
| Protein sequence | MSEKFMKYAG YAGITIILVR PRIPENIGAC CRAMKNMGLS RLKVVAPEAW DPVRIMKTAT
HACRDVVEKI EIVGDTATAV SPFSYIAGTT ARMGRQRQMV LSPGGFAEKA VTLCRENPVA
VMFGPEDRGL ENEDLQYCHN LVHIPTSEFS SLNLAQAVLV ICYELFGAAR PNQDHFQPRL
ASSFELEGMY DQMKEVLLAI DFLRPDNPDY WMNNFRRFVS RVGLTAKEVK LIRGVCRQVN
WYGEKRYADG LAEKKKKDPR
|
|---|
| |