| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2623 |
|---|
| Symbol | |
|---|
| ID | 5695474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3164998 |
|---|
| End bp | 3166302 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641265231 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001530503 |
|---|
| Protein GI | 158522633 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAA CTTCCCCGCG CCCGATCTTT TACGGATGGT ACATTGTGGC CATCGCCTTT
CTGGCCAACT TCATGGCCGT GGGCACCGGA TTTTACGCGT TCAACGCCTT TCTCGAGCCC
CTGTGCGAAG CCCACGGCTG GACCCGGACC CAGGTCAACA TGGCCCTGAT GCTCGGCACC
CCCTTCGGCC TGCTGGGCCA GTTTTTCTTT GGCACCCTGG TGATGCGCAT AGGGGTAAAA
AAGCTCATGA TCACCGGCTC CCTGATATCG GGCATAGCCT TTATGCTGGT GTTCCAGGTG
TCTTCCCTGT GGCTCTTCTA TCTACTTTAT ATTCTGCTTT ACGTGGGCAA TGGCGCCTAT
GGGGGCATCG TGGCCAACTC CGCGGTCAGC AACTGGTTTA TCCGCAAGCG GGGCAAGGCC
CTGGGCATTG CCACTGCCGG CATGTCGCTC TCCGGCGCGG TGCTGCCCCT GGCCGCCATG
ATGTTGATCT CCCGGCTGGG AATGGGGACC ACCGCCATTC TTATCGGCGC CATGGTGCTG
GTGCTGGCCC CCCTGGTCCG CCTGGTGATC GTCAACTGGC CAGAGGACAA GGGGCTGCAA
CCCGACGGAG AGATTCAATC CCAGCCCGAG AGCGAACCGA AACTGTCCGG CGGCCTTGCC
ATGGGTATTA CCACGCCCGG CATTCCCCTT GAACCTTCAT GTGTGCTGGA CGACGTCCCC
CGGTGGACCC TTGGCCGGCT GGTGAGAACA TCGGTCTTCT GGAAAGTGGG CCCTGCCTAT
GCCATGGCCA TGATCGGCGT GGTGGGGGTC ATGTCCCAGT TGAAACCGAG ATTCGTGGAG
GTGGGGTTTT CAGACACAAC GGCCATGCTG CTGATGGCGG CCACGGCCCT TGCCGGCACC
CTGGGCAAAT ATGTGTGGGG CGCCCTGTGC GATGTCATCG CGGCCCCGAA AATGGCATCC
ACCATCATGG CCATCAACGG CATCGGCCTG CTGGCCGCCC TGTTTGTCCA CTCACCGGCG
GCCATCGGGC TTTTTGTCTG CCTGTTCGGG TTTGCCATGG GCGGGGTCAT GTCCACCTAC
CCCATCCTGG TGGCCGACCT TTTCGGCAGA AAGGCCTTTC CCTCGGTCTT TCGGTTCATG
GGAGGCTTTC TGGTCTTTCA GATGCTGGGC TTCGGTATCG CGGGCGCCAG CTTTGACCGA
TTCGGTTCCT ACACACCGGC CTATATCCTG TTCATGGGGC TTGACGTGAT CGCGGCCCTG
ATGCTGCTTT CCGTAAAACG GCCCCCGGCG GCATGTGACG ACTGA
|
|---|
| Protein sequence | MTQTSPRPIF YGWYIVAIAF LANFMAVGTG FYAFNAFLEP LCEAHGWTRT QVNMALMLGT
PFGLLGQFFF GTLVMRIGVK KLMITGSLIS GIAFMLVFQV SSLWLFYLLY ILLYVGNGAY
GGIVANSAVS NWFIRKRGKA LGIATAGMSL SGAVLPLAAM MLISRLGMGT TAILIGAMVL
VLAPLVRLVI VNWPEDKGLQ PDGEIQSQPE SEPKLSGGLA MGITTPGIPL EPSCVLDDVP
RWTLGRLVRT SVFWKVGPAY AMAMIGVVGV MSQLKPRFVE VGFSDTTAML LMAATALAGT
LGKYVWGALC DVIAAPKMAS TIMAINGIGL LAALFVHSPA AIGLFVCLFG FAMGGVMSTY
PILVADLFGR KAFPSVFRFM GGFLVFQMLG FGIAGASFDR FGSYTPAYIL FMGLDVIAAL
MLLSVKRPPA ACDD
|
|---|
| |