| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2608 |
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| Symbol | |
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| ID | 5695459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3150666 |
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| End bp | 3151655 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641265216 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_001530488 |
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| Protein GI | 158522618 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.336008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG TGGTCACAGG CGGGGGCGGG TTTCTGGCCG GGCACCTGAT AGACAAGCTG
GTAGAAGCCG GACATTCTGT CAGGACGGTT GAGCTTCCGG GGCGGAACGT TCAACGGCTG
AAAGATCTGG ATGTGGAGAT TGTTACCGGG GATCTATGTG ATCCGAGCCT TGCCGCGCGG
GCCTGCGAGG GTATGGACGT GGTCTTTAAT CCCGCCGCCC TGGCCGCGCC CCTCGGTCCA
TGGAAACGGT TCTGGTCGAT CAACGTTGAA CTTGTCGACA ATGTAATAGC GGGGTGTAAA
AAGTCGGGCG TCCGTCGCCT GGTGCATGTC AGTTCCCCCT CTGCTGTTTT TGACGGCAGC
GACCACTTTG ACGCTGATGA AACGCTTCCC TTTCCAAAAA AGTTTTTAAA CTACTACTGC
GCGACCAAGG CGGAGAGCGA AAAGCGCGTC CTGGCGGCCA ATGGCACAGA CCTTGAAACC
GTTGCGATCC GGCCACACGC GATCTGGGGG CCAAGAGACC GCACCCTGTT TCCGCGCATT
ATCGAGCGGG CCAAATCACG CCGTCTCGTT CAGGTAGGAG ACGGAACCAA TATCATCAGC
ACCCTTTATG TGGAGAACGG TGCCGATGCC CTGATCCTGG CGGCCACCGC GGATAGAGCA
CCGGGTAACG TCTATTTTGT GACGGACAAC GACACGGTTA ACCTGTGGGG CTTTTTAAGA
CGCATACTGA ACGACCTGGG TTTGCCACCG ATCAGGGCCA GGATCCCTTA CCCGCTTGCT
TATACACTTG GCGCCACTCA GGAGGTATTA TGGACGGTTC TGAAGTTGTC CGGCGAGCCG
ACCATTACCC GCTATTCCGC TGCCGAACTC GCTAAAAATC ACAGCTATTC CATAGATCGC
GCCCGTACTG ATTTGGGTTA TGAGCCAACG GTTTCGCGGG AAGAGGGTCT ACAACGTTTT
TATGAGTGGG TCAGGAACAA CCTGCTTTGA
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| Protein sequence | MKAVVTGGGG FLAGHLIDKL VEAGHSVRTV ELPGRNVQRL KDLDVEIVTG DLCDPSLAAR
ACEGMDVVFN PAALAAPLGP WKRFWSINVE LVDNVIAGCK KSGVRRLVHV SSPSAVFDGS
DHFDADETLP FPKKFLNYYC ATKAESEKRV LAANGTDLET VAIRPHAIWG PRDRTLFPRI
IERAKSRRLV QVGDGTNIIS TLYVENGADA LILAATADRA PGNVYFVTDN DTVNLWGFLR
RILNDLGLPP IRARIPYPLA YTLGATQEVL WTVLKLSGEP TITRYSAAEL AKNHSYSIDR
ARTDLGYEPT VSREEGLQRF YEWVRNNLL
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