| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2601 |
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| Symbol | |
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| ID | 5695452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3142953 |
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| End bp | 3144377 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265209 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001530481 |
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| Protein GI | 158522611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.547999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATC CGAATAAAAA CAGAATCCCG GATGATGTCA AAAATGTCCA TTTGATTGCG
GTGTGCGGAA CGGCCATGGC GGCCCTGGCC TGCATGCTCA AGGAGCTGGG GTATGCGGTG
ACCGGGTCGG ACAGAAATGT CTACCCGCCC ATGAGCGATC TTCTGGCCCA AAATCAGATT
CCCGTGGCCC GGGGGTTTGC CGCGGAAAAC CTGGATAACC GGCCCGACCT GGTGGTGGTG
GGCAATGCCG TGTCCAAAGA CAATGCCGAG GTGGTGCGGC TGGCTGAGGC GGGCCTTGCC
TACTGCTCCA TGCCCCAGGC CATACAGCAC TTTGCCGCAA AAGACCGGGA GGTGCTGCTG
GTGTGCGGTA CCCACGGCAA AACCACCGCC TCTTCTTTGC TGGCGTGGAT GCTCTATTCC
GCGGGCCTGG ACCCGTCATT TGTGATCGGC GGCGTGGTAA AAGACTTTGG CGGCAACTAT
CGGCTGGGCA AGGGCCGGCA CATGGTGATC GAGGGTGACG AGTATGACAC CGCGTTTTTT
GACAAGCGGT CCAAGTTTTT TCACTACCGG CCAAAGGTGG CCATTTTAAC CGGCGTGGAG
TTTGACCATG CCGATATTTT TGCCGACTTT GGGGCTGTTC GAAAAACCTT TGATAAGTTT
ATCGGCGGCC TTTTGCCGGA AAGCCTGCTT CTGGCATTTG ATTCAGACCC GGTGGTGAGG
GACCTGGTAA AAGGCCGGGC CTGCAATGTT AAAATGTACG GCAACCGGGA CGATTCGGCG
TGGCGGCTGG GCAGGGTGAC ATTACAGCCG CCGGCCAGCG TGGTGGAGAT GATATGCGGC
GATGCGGTGT TTGGCACGTT TGAGACCCGG CTGATCGGCC GGTACAACCT GTTAAACGCC
CTGGCAGCCG CGGCCGCGGC CCACAGCGTG GGCGTGCCGG CGGAAGAGAT AAAAAAAGCC
CTGGCCACTT TTTCCGGGGT GCGGCGGCGG CAGGAGGTGC GGGGCGTGGT GCGCGGGGTT
ACGGTGATGG ACGATTTTGC CCACCATCCC ACGGCCGTGG CCGCGACCAT TGCCGGGGTG
AGGCCCTTTT ACCCGGAGGG ACGGCTGATC GCGGTGTTTG AACCCAGAAC CAACACCAGC
ATGCGCAACG TGTTCCAGCA GGATTACGCA AAGGCCTTTG ACCTGGCGGA CATGGTGTGT
GTCAGCCGGG TGCCCCTGCC GGAAAAGGTG CCTGAAGGCA TGCGCTTTTC TTCACAGCAG
CTGGCCGATG ACCTTATAAA AAGCGGCAAG GAGGCGTACT GTTTTGACGG GGCCGACGCC
ATTGTGGATT TTTTAAAGGG CAGGGCAGCT GCCGGAGACG TGGTGCTGGT GATGTCCAAC
GGCGGGTTTG ACAACATTCA TGAGAAGCTG CTGGTCGGTC TTTAA
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| Protein sequence | MIDPNKNRIP DDVKNVHLIA VCGTAMAALA CMLKELGYAV TGSDRNVYPP MSDLLAQNQI
PVARGFAAEN LDNRPDLVVV GNAVSKDNAE VVRLAEAGLA YCSMPQAIQH FAAKDREVLL
VCGTHGKTTA SSLLAWMLYS AGLDPSFVIG GVVKDFGGNY RLGKGRHMVI EGDEYDTAFF
DKRSKFFHYR PKVAILTGVE FDHADIFADF GAVRKTFDKF IGGLLPESLL LAFDSDPVVR
DLVKGRACNV KMYGNRDDSA WRLGRVTLQP PASVVEMICG DAVFGTFETR LIGRYNLLNA
LAAAAAAHSV GVPAEEIKKA LATFSGVRRR QEVRGVVRGV TVMDDFAHHP TAVAATIAGV
RPFYPEGRLI AVFEPRTNTS MRNVFQQDYA KAFDLADMVC VSRVPLPEKV PEGMRFSSQQ
LADDLIKSGK EAYCFDGADA IVDFLKGRAA AGDVVLVMSN GGFDNIHEKL LVGL
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