| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2600 |
|---|
| Symbol | |
|---|
| ID | 5695451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3141755 |
|---|
| End bp | 3142792 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641265208 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001530480 |
|---|
| Protein GI | 158522610 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAA GCGCCACCCT CAGCCGTAAG ATCGCAAACG GCATCTTTTC CATCCGGCTG
CCCCTGACCG GCGACAAGCC GGGGCCGGTC AACGTCTACC TGTTTACCGG AAAAAACAAC
GTTACCCTGT TGGACACCGG AACCGCCGGG GCTTTCGGCG TGCTGCAAAA GGCCCTGGCC
GAGCACGGCA TGGGCTGCGG CGACATTGGC CGCATCGTGC TGACCCACAG CCACATCGAC
CACTACGGGT CGGTCCAGAA GATCCTGCGT GCGGCCCGCC GGCCCGTTGA CATTGCCGGC
AACTTCACCC AGCCGGTGAG CATTGCCACG GGCATCGGTG TTTCCCGGCA GACCATGGGG
GCGTTTCTGG CCCTGATGGG GGTGCCTTTT GCCGTTCGCC ACCTGATGCG CATCCTCTCC
GTTGTGTTTT CATCCATGGG GGAAAGCTGC GAGGTGACCA CCCGGATTAA AGAGCCGGAC
TCCGTGGAAA TGGGCGATTA TACCTGCCGG GTCATTGAAA CCCCGGGCCA CACACGGGAC
TCCATCTGCC TGTACCATGA CGCCACGGGC ATGCTCTTTT CCGGGGACCA TGTGCTGCCC
CATATCACGC CCAACGCCTT TGTCATGCTG CGGGAAAACG AGCCCCTGCC CCGGCGGCTG
AGCCAGAAGG AATTTTACGG CTCCATTGAA AAGGTGCGGG CCCTGTCCCC CACGGTGGTT
TATCCGGCCC ATGGCCGGGC CATCACCGAT CTGGAAGCGG TGGTGCGCAT GTACACGGTC
AGCTATCAGA ACCGGAACCG GCTGATTCTT GCCCTTCTTG AAAAAGGAGA ACAGAGCATC
TACCAGGTGG CCCGCCGGCT GTTTCCCAAC CTGCGCACGG CCCGGCTGCC CCTGGAGATT
TTTCTGGCCG TGTCCGAGGT CTATACCCAT GTTCAGGTTC TGGAAGAAAA GGGACTTGTG
AAAACCGGGC CTGTCGGCGG GGTGCTGATG GTTTCATTGC CCGGCCGGCA GACGTCGCCC
CGAACAGACC CGGCCTGA
|
|---|
| Protein sequence | MKKSATLSRK IANGIFSIRL PLTGDKPGPV NVYLFTGKNN VTLLDTGTAG AFGVLQKALA
EHGMGCGDIG RIVLTHSHID HYGSVQKILR AARRPVDIAG NFTQPVSIAT GIGVSRQTMG
AFLALMGVPF AVRHLMRILS VVFSSMGESC EVTTRIKEPD SVEMGDYTCR VIETPGHTRD
SICLYHDATG MLFSGDHVLP HITPNAFVML RENEPLPRRL SQKEFYGSIE KVRALSPTVV
YPAHGRAITD LEAVVRMYTV SYQNRNRLIL ALLEKGEQSI YQVARRLFPN LRTARLPLEI
FLAVSEVYTH VQVLEEKGLV KTGPVGGVLM VSLPGRQTSP RTDPA
|
|---|
| |