| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2596 |
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| Symbol | |
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| ID | 5695447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3138267 |
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| End bp | 3139637 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641265204 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001530476 |
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| Protein GI | 158522606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGA GACGACCGCT TCGACGCGTG ACCGTGGTGC TGTTGTGGGT GGCCCTGGCC
ATTGGCGTTG CATGGTTTTA TGATTACCGG CGTTCCATGC AGTCCCTGTG GAAAATCCGG
CAGCATGGCA AAATCGTCGT TCTGACGGAA AACAACGCCA ACAGCTACTA CATCTATAAA
GAGACCCCCA TGGGGTTTGA ATATGATCTG GCAAAGGCCT TTGCCGGACA TCTGGGTGTG
GACCTGGAGG TCAAAACGCC GGGGTGGGAT GCTCTGTTTG CCTCCCTGCA GCGGGGAGAC
GGCGATTTCA TCGCGGCCAG CATGACCCAC ACCAGAAAAC GCGAACAGTA CGCCGATTTT
TCCGAGCCCT ATCTTTCGGT ACGCCAGCAC CTGATTCTTC ACAAGTCCGA CCACAGCATC
GTAACACCGG CCGGCCTGGC CGGCCGGACG GTCCATGTGC GGGAGGACAC CACCTACCAG
CAGCGGCTGG AGGCGTTGCA GGCCGACGGC ATCGACCTGC AACTGGTGCT TCACCGGAAC
ACCCCCACCG AGGAACTGAT CGAGCAGGTG GCCAAGAGAC AAATCGACAT CACCGTGGCC
GATTCGGCCA TCGCGCTGCT GAACCGGCGC TACTACCCGG ACATCCGTAT CGCCTTTCCC
ATTGAAAAGG AGCAGCCCCT GGCCTGGGCC GTACGCAAGG GAGACAGGGG CCTGCGGACC
GAAATCAACC GCTTTTTTGA CGAGATCAAA GAAAACGGGA CCTTTACAAG AATTTATAAC
CGGTATTATA CGGCAGTGGA TACCTTTGAT TACGTGGATG TCAAAAAATT CCACCAGCGA
ATCTACACCC GGCTCCCCCG GTTCCGGCCC CTGATTGAAA AGGCCGCGGA CCGTCATGGT
TTTGACTGGC AGATGATCGC GGCGGTGATC TACCAGGAGT CCCATTTTGA CCCCTTTGCC
CAGAGTCACA CAGGGGTCAA GGGATTGATG CAGCTCACCC GGGTGACCGC GGAGGAGATG
GGGGTGACCG ACCGGTTCGA TTTCGAGCAG AACATCACCG CCGGCGTGGC CTACCTGGCC
AAATTGCGCC ACCGGTTTGA CGATATTGAG GATCCCCGCA CCCGTCTGCT TTTTGCCCTG
GCCAGTTATA ACATCGGCTA CGGCCATGTG CGGGACGCCC AGCAGATCGC CAAAAACATG
GGCATGGACC CCAACCGGTG GCAGTCCCTG AAGGAGGTCC TGCCCCTGCT GCGAAACCGG
GAGTATTACG CGGACACCAC CTACGGGTAC GCCAGGGGAA ACGAGGCGGT CCGCTATATA
GAGCGTATTC TTACCTACTA CGATATTCTG AAACAGAAAA AGGCCGTCTG A
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| Protein sequence | MAMRRPLRRV TVVLLWVALA IGVAWFYDYR RSMQSLWKIR QHGKIVVLTE NNANSYYIYK
ETPMGFEYDL AKAFAGHLGV DLEVKTPGWD ALFASLQRGD GDFIAASMTH TRKREQYADF
SEPYLSVRQH LILHKSDHSI VTPAGLAGRT VHVREDTTYQ QRLEALQADG IDLQLVLHRN
TPTEELIEQV AKRQIDITVA DSAIALLNRR YYPDIRIAFP IEKEQPLAWA VRKGDRGLRT
EINRFFDEIK ENGTFTRIYN RYYTAVDTFD YVDVKKFHQR IYTRLPRFRP LIEKAADRHG
FDWQMIAAVI YQESHFDPFA QSHTGVKGLM QLTRVTAEEM GVTDRFDFEQ NITAGVAYLA
KLRHRFDDIE DPRTRLLFAL ASYNIGYGHV RDAQQIAKNM GMDPNRWQSL KEVLPLLRNR
EYYADTTYGY ARGNEAVRYI ERILTYYDIL KQKKAV
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