| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2577 |
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| Symbol | |
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| ID | 5695428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3118392 |
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| End bp | 3119135 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265185 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001530457 |
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| Protein GI | 158522587 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000513605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTG TTTTTCATCC CGATTTTTAC CAGGTCTACA CATCGGACCC GGCCGCGGCA
AAGGGCCGAA TGGAGGCCGT GGTCAAGGTC ATCGACCCTT TTGCCGGGTT TGTGACCGCC
GAGATGGCGG ACCATAACGA CGTGGCGGCC GTGCACACCG AAGCCCATAT CGACGAGGTG
AGGCGTCAGC GGCTCTATCC TGTTGCCATG CTGGCCGCGG GTGGGGCCGT GCAGGCCGCC
CAAATCGGCC TGGCCGAGCC CTGCTTTGCC CTGGTCCGGC CACCGGGCCA CCACGCCTCT
GCCGATGCCT CCTGGGGGTT CTGCTATTTC AACAACATGG CCGTGGCCAT TGCGTCTTTG
AAAAACCGGG GCCGCATCGA CAGTGCCTAT GTGCTGGACA TCGACCTTCA CTACGGCGAC
GGCACCGTGA ACATTCTGGG AGACAAGTCC TATGTCACGG TCCATAACGT GGATGCCATG
CGGCGCGACG CCTATCTGCG GGAGGTGGCA GACGCCATGG ACCGGTGCGA GGCCGACATT
ATCGGCATTT CCGCCGGGTT TGACAACCAC ATGGAAGACT GGGGCGGGGT CCTGTCCACC
GGCGACTATT TTGAGATCGG CAAAATGGCG GCCGGCGCGG CCCGGCGAAA CAGCGGCGGA
TGCTTTGCCG TCCTGGAGGG GGGCTACAAC CACGATGTGC TGGGCCAGAA CGTCCTGGCC
CTGATCCAGG GCATGGCAGC ATGA
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| Protein sequence | MKVVFHPDFY QVYTSDPAAA KGRMEAVVKV IDPFAGFVTA EMADHNDVAA VHTEAHIDEV
RRQRLYPVAM LAAGGAVQAA QIGLAEPCFA LVRPPGHHAS ADASWGFCYF NNMAVAIASL
KNRGRIDSAY VLDIDLHYGD GTVNILGDKS YVTVHNVDAM RRDAYLREVA DAMDRCEADI
IGISAGFDNH MEDWGGVLST GDYFEIGKMA AGAARRNSGG CFAVLEGGYN HDVLGQNVLA
LIQGMAA
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