| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2568 |
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| Symbol | |
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| ID | 5695419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3103755 |
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| End bp | 3104504 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265176 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001530448 |
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| Protein GI | 158522578 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000104068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA TTAAAACCAT AAAATCCAGA GCCCCCAAAG ACTACCTGGT CTTTGCCCTG
GATGTGCCAA CGGTTTCCGA AGCCGCGGAA TACGTTCACC TTTTAAAAAA TCACGTGGGC
ATGTTCAAGG TGGGCCTGGA GCTGTTTGTC CGGGGCGGCC GCCGTATCAT CGACACCATT
CACGATGCCG GGGGCGGCGC AAAGATATTT CTGGACCTCA AGCTTTACGA TATTCCGGAG
ACGGTCTACC GCACCATGAA CGCCATTGCC GCCATGGGCG TGGATTTTGC CACGGTCCAC
TGCTCGGGCC AGAAAGACAT GCTGGCCGCG GCTCAGGAGG GGGCGGACGG CCAGGTGGGA
GTCCTGGGCG TCACTGTGCT GACCAGTATG TCCGCCGATG ATGTGCGCGA CGCCGGCTAT
GGGCCGGAGT ATATTGAAAA CATCTCCCGC TTGGTGATGA AGCGGGCTGC TGCCGCCGCT
GAATGGGGAT TTGCCGGCAT CGTCTGCTCC CCGCTGGAGG TGTCGGCCAT GAAGGAGCGG
TTCGGCAAGG GTTTTGTCGC GGTCACGCCG GGCATTCGGC CGGCAAAAGG GCTGGTCTCC
CGCGATGACC AGAGCCGCAT CTCCACCCCG GGCCAGGCCA TTCGCAACGG CGCCGACTAC
CTGGTGGTGG GCCGTCCCAT CCGCGAACCC GACGACTCGG CCGCTGCCGC CGCCGCCATC
TGCAAAGAGA TTGAAGAGGC CCTGAAATAG
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| Protein sequence | MTSIKTIKSR APKDYLVFAL DVPTVSEAAE YVHLLKNHVG MFKVGLELFV RGGRRIIDTI
HDAGGGAKIF LDLKLYDIPE TVYRTMNAIA AMGVDFATVH CSGQKDMLAA AQEGADGQVG
VLGVTVLTSM SADDVRDAGY GPEYIENISR LVMKRAAAAA EWGFAGIVCS PLEVSAMKER
FGKGFVAVTP GIRPAKGLVS RDDQSRISTP GQAIRNGADY LVVGRPIREP DDSAAAAAAI
CKEIEEALK
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