Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2558 |
Symbol | |
ID | 5695409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3094636 |
End bp | 3095424 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641265167 |
Product | exodeoxyribonuclease III |
Protein accession | YP_001530439 |
Protein GI | 158522569 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCAAAC GAAAAATCAA ACTGGTCTCC TGGAACGTCA ACGGCCTGCG GGCCGTGATG GGCAAGGGCT TTCTGGAAAC GTTTAAAAAC CTGGATGCCG ACGTGGTCGG CATCCAGGAG ACCAAACTCC AGGCCCCCCA GGTGACCGGC GACATGGCAA ACATCGAGGG CTACACCTCG TACTGGGCCC ATGCCACGAC AAAAAAAGGC TACAGCGGGG TGGCCGCCTT TTCCCGGATG CCGGTCAAAA ACGCGAAGAC CGGCATGGGC CGGGAGGAAT ACGACAACGA AGGCCGGATT GTCGAACTGG ATCTTGGGGA TTTTATTTTT TTCAACATCT ACTTTCCCAA CGGCCAGATG GGTGAAGACC GGTTGACCTA CAAGCTGGAC TTTTACCGCG ACTTTTTCGC CTATGCCGAC GCGTATCGCA AGCAGGGCCG AAGCCTGGTG ATCTGCGGGG ACTACAACAC GGCCCACAAC GAGATTGACC TGAAAAACCC CAAAGCCAAT GAAAACACAT CGGGGTTTAT GCGCATCGAG CGGGACTGGC TGGACAAAAT CTCAGCCGAT GGATATGTGG ACACCTTTCG CCACCTTTAC CCGGACACGG TCAAATATTC GTGGTGGACC TACCGGTTCA AGGCGCGGGA GCGGAACGTG GGGTGGCGCA TCGACTACTT TTTCGTGACC GAAGACATTA TATCCAAAGG CTGGCTCAAA GACGCCTTTA TCGACAACAC GGTTTATGGA TCAGACCACT GCCCGGTGGG CCTGGTGCTG GAGATATAA
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Protein sequence | MAKRKIKLVS WNVNGLRAVM GKGFLETFKN LDADVVGIQE TKLQAPQVTG DMANIEGYTS YWAHATTKKG YSGVAAFSRM PVKNAKTGMG REEYDNEGRI VELDLGDFIF FNIYFPNGQM GEDRLTYKLD FYRDFFAYAD AYRKQGRSLV ICGDYNTAHN EIDLKNPKAN ENTSGFMRIE RDWLDKISAD GYVDTFRHLY PDTVKYSWWT YRFKARERNV GWRIDYFFVT EDIISKGWLK DAFIDNTVYG SDHCPVGLVL EI
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