Gene Dole_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2558 
Symbol 
ID5695409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3094636 
End bp3095424 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content55% 
IMG OID641265167 
Productexodeoxyribonuclease III 
Protein accessionYP_001530439 
Protein GI158522569 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAAAC GAAAAATCAA ACTGGTCTCC TGGAACGTCA ACGGCCTGCG GGCCGTGATG 
GGCAAGGGCT TTCTGGAAAC GTTTAAAAAC CTGGATGCCG ACGTGGTCGG CATCCAGGAG
ACCAAACTCC AGGCCCCCCA GGTGACCGGC GACATGGCAA ACATCGAGGG CTACACCTCG
TACTGGGCCC ATGCCACGAC AAAAAAAGGC TACAGCGGGG TGGCCGCCTT TTCCCGGATG
CCGGTCAAAA ACGCGAAGAC CGGCATGGGC CGGGAGGAAT ACGACAACGA AGGCCGGATT
GTCGAACTGG ATCTTGGGGA TTTTATTTTT TTCAACATCT ACTTTCCCAA CGGCCAGATG
GGTGAAGACC GGTTGACCTA CAAGCTGGAC TTTTACCGCG ACTTTTTCGC CTATGCCGAC
GCGTATCGCA AGCAGGGCCG AAGCCTGGTG ATCTGCGGGG ACTACAACAC GGCCCACAAC
GAGATTGACC TGAAAAACCC CAAAGCCAAT GAAAACACAT CGGGGTTTAT GCGCATCGAG
CGGGACTGGC TGGACAAAAT CTCAGCCGAT GGATATGTGG ACACCTTTCG CCACCTTTAC
CCGGACACGG TCAAATATTC GTGGTGGACC TACCGGTTCA AGGCGCGGGA GCGGAACGTG
GGGTGGCGCA TCGACTACTT TTTCGTGACC GAAGACATTA TATCCAAAGG CTGGCTCAAA
GACGCCTTTA TCGACAACAC GGTTTATGGA TCAGACCACT GCCCGGTGGG CCTGGTGCTG
GAGATATAA
 
Protein sequence
MAKRKIKLVS WNVNGLRAVM GKGFLETFKN LDADVVGIQE TKLQAPQVTG DMANIEGYTS 
YWAHATTKKG YSGVAAFSRM PVKNAKTGMG REEYDNEGRI VELDLGDFIF FNIYFPNGQM
GEDRLTYKLD FYRDFFAYAD AYRKQGRSLV ICGDYNTAHN EIDLKNPKAN ENTSGFMRIE
RDWLDKISAD GYVDTFRHLY PDTVKYSWWT YRFKARERNV GWRIDYFFVT EDIISKGWLK
DAFIDNTVYG SDHCPVGLVL EI