| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2549 |
|---|
| Symbol | |
|---|
| ID | 5695400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3084875 |
|---|
| End bp | 3086107 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641265158 |
|---|
| Product | polysulphide reductase NrfD |
|---|
| Protein accession | YP_001530430 |
|---|
| Protein GI | 158522560 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5557] Polysulphide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTG CACTCATTCC TCAAGGGGTC AGGCGTTGTC CGCTGCCGGT ATTCCTTATC
GGCGTCGCGG TGGTGGGCGC GGTGCTGCTG TGGGGCGTTT ACGCCATGCT GCTGTGCTGG
CTCAAAGGCC TCAACCAGAC CAACATGAAC GATTACTACG GATTCGCCCT GTGGATATGG
GCCGACCTGG CGGTGATCGC CCTGGGCGGC GGCGCCTTTT TCACGGGTTT TCTGCGTTAC
ATCGTGGGAA AGGATGAGCT GAAAAACATC ATCAACTTCG CCGTTGTCAT CGGGTTTATC
TGCTACAGCT CGGCGCTGCT GATTCTGGCC ATCGATATCG GCCAGCCCCT GCGGGGATGG
TTCATCTTCT GGCACGCCAA CGTTCACTCC ATGCTCACCG AGGTGGCCTT CTGTCTGTCG
TGCTACTTTG CCGTGCTGAC CATCGAGTTT ATTCCCCTGA TCCTGGAGAA CCGGCAGCTG
GCCAAGGTGC GCTTCTTCCA TCACCTGGGC CACAACATGC ACGAAATCAT GGCCGTGTTT
GCCGCCACCG GCGCTTTTCT GTCCTTCTTT CACCAGGGAT CCCTGGGCGG CGTGGCCGGT
GTTCTGTTCG GCCGGCCCTT CGGCTTCCGG GAGCATGTAC TGGTATGGCC CACCACCTTC
TTTCTGTTCA CCTGGTCGGC AGCGGCCTGC GGCCCCTGCT TCACCATCCT GGTCACCAAG
ATCACCGAGG CCGTCACCAG GAAAAAACTG GTGGGCGACG CGGCCATTCA CACCCTGGCC
AAGATATCCG GATGGATGAT CACCACCTAC GTGATCGCCA AGATCATCGA CACCGTCTAC
TGGGCCGCGG TCACCGCACC CGAGCACGCC GGCCAGGCCC TGGGCGCCTT CTACGCCAAC
TGGTTTTACG GCTACTGGAT GCTGATCGCC GAGGTGATCG TGGGCGGCCT GATTCCCGGG
CTGATGCTGC TGTCCCCCAG GGTGCGAAGC AACGGCAAGC TGCTGGTTGC CGCCGCGGTG
CTGGCCTGCG TGGGTGTTTC CATCAACCGG TGGGTCATGG TGCTTCAGGT CATGGCGGTT
CCGGTAATGC CCTTTGACCA GTGGGTGCTC TACTTTCCCA GCTGGCAGGA GATCGCCACC
ACCATTCTGC CGGTGGCCTA CGGCATTCTG CTGATCTCTC TTGCCTATCG TTACCTGCCG
GTGTTCCCGC AGGAAAAGGA GTTAAACAGC TAA
|
|---|
| Protein sequence | MDSALIPQGV RRCPLPVFLI GVAVVGAVLL WGVYAMLLCW LKGLNQTNMN DYYGFALWIW
ADLAVIALGG GAFFTGFLRY IVGKDELKNI INFAVVIGFI CYSSALLILA IDIGQPLRGW
FIFWHANVHS MLTEVAFCLS CYFAVLTIEF IPLILENRQL AKVRFFHHLG HNMHEIMAVF
AATGAFLSFF HQGSLGGVAG VLFGRPFGFR EHVLVWPTTF FLFTWSAAAC GPCFTILVTK
ITEAVTRKKL VGDAAIHTLA KISGWMITTY VIAKIIDTVY WAAVTAPEHA GQALGAFYAN
WFYGYWMLIA EVIVGGLIPG LMLLSPRVRS NGKLLVAAAV LACVGVSINR WVMVLQVMAV
PVMPFDQWVL YFPSWQEIAT TILPVAYGIL LISLAYRYLP VFPQEKELNS
|
|---|
| |