Gene Dole_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2546 
Symbol 
ID5695397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp3081108 
End bp3081770 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID641265155 
Producthypothetical protein 
Protein accessionYP_001530427 
Protein GI158522557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000133101 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC AAGACAAATC GACGCATCCT TCTGTTGACG GCGGCAATCA GGAAAGCCCC 
AAAGACAAGG GCGGCCTTGC CATGCTGATC GCCTTTATCA TCGGCCTTGT CGGCTCCCTG 
GTTGTGGGCT GGGTGGTCTT TCCGGCGCTG CTCTACTCTG AAAAAGAGCA GCCCTTTCAG 
TTCAATCACG CCCTTCACCT GGATGAACTG GGGGACTGCG AAGCCTGCCA CTTCTTCCGT 
GAAGACGGCA CCTTTGCCGG CATCCCCACC CTCAACGCGT GTCTCGACTG CCACAGCTAC 
GCCATCGGCG ATACCGAGGC GGAGCTGACC TTTGTCGAAC AGTACGTGGA CCAGAACAAA 
GAGGTCCCCT GGCTGATCTA TTCCCGGCAG CCCGATTGTG TTTTCTTCTC CCACGCGGCC 
CATGTTCGAA AGGCCGGTAT GGATTGTATT ACCTGCCATG GTTATCTCGG TGTATCGGAA 
AGCCTGCCCG TCTACCAGGA AAACCGGATC ACCGGCTACA GCCGGGACAT CTGGGGATAC 
GACATCACCG GCTCAAGCCT GTTCAAAAAG AACGTATGGG AAAGCATGAA GATGGACGAC 
TGCGCCCGGT GCCACGAGGA GGAAACCGGC AGCAAGGGCG CCTGTTTCCA GTGCCACAAA 
TAA
 
Protein sequence
MSAQDKSTHP SVDGGNQESP KDKGGLAMLI AFIIGLVGSL VVGWVVFPAL LYSEKEQPFQ 
FNHALHLDEL GDCEACHFFR EDGTFAGIPT LNACLDCHSY AIGDTEAELT FVEQYVDQNK 
EVPWLIYSRQ PDCVFFSHAA HVRKAGMDCI TCHGYLGVSE SLPVYQENRI TGYSRDIWGY 
DITGSSLFKK NVWESMKMDD CARCHEEETG SKGACFQCHK