Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2546 |
Symbol | |
ID | 5695397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3081108 |
End bp | 3081770 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265155 |
Product | hypothetical protein |
Protein accession | YP_001530427 |
Protein GI | 158522557 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000133101 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC AAGACAAATC GACGCATCCT TCTGTTGACG GCGGCAATCA GGAAAGCCCC AAAGACAAGG GCGGCCTTGC CATGCTGATC GCCTTTATCA TCGGCCTTGT CGGCTCCCTG GTTGTGGGCT GGGTGGTCTT TCCGGCGCTG CTCTACTCTG AAAAAGAGCA GCCCTTTCAG TTCAATCACG CCCTTCACCT GGATGAACTG GGGGACTGCG AAGCCTGCCA CTTCTTCCGT GAAGACGGCA CCTTTGCCGG CATCCCCACC CTCAACGCGT GTCTCGACTG CCACAGCTAC GCCATCGGCG ATACCGAGGC GGAGCTGACC TTTGTCGAAC AGTACGTGGA CCAGAACAAA GAGGTCCCCT GGCTGATCTA TTCCCGGCAG CCCGATTGTG TTTTCTTCTC CCACGCGGCC CATGTTCGAA AGGCCGGTAT GGATTGTATT ACCTGCCATG GTTATCTCGG TGTATCGGAA AGCCTGCCCG TCTACCAGGA AAACCGGATC ACCGGCTACA GCCGGGACAT CTGGGGATAC GACATCACCG GCTCAAGCCT GTTCAAAAAG AACGTATGGG AAAGCATGAA GATGGACGAC TGCGCCCGGT GCCACGAGGA GGAAACCGGC AGCAAGGGCG CCTGTTTCCA GTGCCACAAA TAA
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Protein sequence | MSAQDKSTHP SVDGGNQESP KDKGGLAMLI AFIIGLVGSL VVGWVVFPAL LYSEKEQPFQ FNHALHLDEL GDCEACHFFR EDGTFAGIPT LNACLDCHSY AIGDTEAELT FVEQYVDQNK EVPWLIYSRQ PDCVFFSHAA HVRKAGMDCI TCHGYLGVSE SLPVYQENRI TGYSRDIWGY DITGSSLFKK NVWESMKMDD CARCHEEETG SKGACFQCHK
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