| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2543 |
|---|
| Symbol | |
|---|
| ID | 5695394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3077958 |
|---|
| End bp | 3078830 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641265152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530424 |
|---|
| Protein GI | 158522554 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.205644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA AAAAAAACAC CCGCGAATTT GTTTATAGAC CGCCTTACAA CCTGTTTCTG
ATCACCGTCG GGGCGGCCCT CTTCTCCTTT GGCGTCCAGA CCGTGGTCTC TCCCCAGATG
TTTATCACCG GCGGCGTTTA CGGCACCGGC CTGCTGATCT ACTACACCGC CGGAACCCTC
AGCCCGGGCC TGTGGTTTTT CCTGCTTAAC ATTCCGCTGT TCGTGGTGAG CTGGTTTTTT
GTCAGCCGGC GGTTCTTTTT CTACAGCCTC TACGCCATGA TCCTGGTTTC ACTTTTTTCC
ATCTGCATCG AAGGAGACCT GAAAATTCAG AACCAGGTCT ATGCCGCCAT TGCCGGTGGC
GTGCTGTGCG GCGCCGGCGG CGGCATGGTG CTGCGGTCCC TGGGCTCGGG CGGGGGGCTG
GACGTGGTGG CCATTATTTT AAACCAGCGG TTCAACATCG GCATCGGCCG GTTTTACATG
GCCTTCAACA GCCTGCTGCT GTTTGCCTTT TTCCTGATCC AGCGGAACAT CGACCTGTTT
ATCGCCTCCC TGATCGTGGT CTTTGTTTCA GCCACCATGG TGGACTACAT GCTGGCCCTT
TTTAACGCCC GTAAGCTGGT GCTGGTCATC AGCGACAAAA ACCCCGCCAT TGCCAGGCGT
CTGCAGGAAG ACCTTCGCCA GGGCGCCACC ATTATAAAGG CAAGGGGTGG TTTTTCCGGC
AAAGACAAGG AGGTGCTGAT GGTGATCACC AACAACATCG TTCTCAAACG CCTGGAGGAG
CTGGTTTTTA CGGTTGACCC GCACGCCCTG TTTGTGGTGG AAAATACCTT CAATGTCATC
GGGTCAACCT TTGGGAAGCG AAAAATATAC TGA
|
|---|
| Protein sequence | MSSKKNTREF VYRPPYNLFL ITVGAALFSF GVQTVVSPQM FITGGVYGTG LLIYYTAGTL
SPGLWFFLLN IPLFVVSWFF VSRRFFFYSL YAMILVSLFS ICIEGDLKIQ NQVYAAIAGG
VLCGAGGGMV LRSLGSGGGL DVVAIILNQR FNIGIGRFYM AFNSLLLFAF FLIQRNIDLF
IASLIVVFVS ATMVDYMLAL FNARKLVLVI SDKNPAIARR LQEDLRQGAT IIKARGGFSG
KDKEVLMVIT NNIVLKRLEE LVFTVDPHAL FVVENTFNVI GSTFGKRKIY
|
|---|
| |