Gene Dole_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2542 
Symbol 
ID5695393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3077521 
End bp3077961 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID641265151 
Producthypothetical protein 
Protein accessionYP_001530423 
Protein GI158522553 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.322137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACA ACCTGCTCGC ATGTCTTCTG ACTGTGGCCA TGGCCGGCTG CGCCGGTACG 
CTGCCCGGCC TGGGCGTCCA TGACGGCCGG CTGACCCCCT GCCCGGACAC GCCCAACTGC
GTGAACAGCC AGGCAACCGG CGGCCATTTT ATCGAGCCCA TTTCCTACAT CGGCACGGCC
CGGGAAGCCA TGGACCGGCT GGTGCAGCTC CTGAAAACCG AAAAACGGGT GGTCCTGGTC
ACTGTTGAAC CGGCTTATAT TCACGCCACC TTTACCTCGC TTGTCTTCCG GTTTGTTGAT
GATGTTGAGT TCTACTTTCC CGACGAACCG GTCATTCATG TGCGGTCCGC CTCGCGGGTA
GGCCACTCGG ATCTGGGCGC CAACCGCCGC CGCATCGAGC ATATCCGTAA CCGCTTTGCC
GCGTCAGAAA AGAGAACATG A
 
Protein sequence
MNHNLLACLL TVAMAGCAGT LPGLGVHDGR LTPCPDTPNC VNSQATGGHF IEPISYIGTA 
REAMDRLVQL LKTEKRVVLV TVEPAYIHAT FTSLVFRFVD DVEFYFPDEP VIHVRSASRV
GHSDLGANRR RIEHIRNRFA ASEKRT