Gene Dole_2540 details

Gene Information

• Locus tag: Dole_2540
• ID: 5695391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3075319
• End bp: 3075927
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641265149
• Product: NADH:ubiquinone oxidoreductase, subunit E
• Protein accession: YP_001530421
• Protein GI: 158522551
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGACC TGATCACCAT ATTTTTAAAC TCGGTCTTTG TGGGCAACAT CCTGCTGGCC 
TATTTTCTGG GCATGTGCTC CTTTGTGGCG GTCTCGAAAA ACATTCACAC CGCCACGGGC 
CTGGGATTTG CCGTGGTGTT CGTACTGACC ATCACCACGC CCCTCAACTG GCTGGTCTAC 
ACGTTCCTTC TGGCCCCCGG CGCCCTGGCC TGGGCCGGCC TGCCCAACGT GGATTTGAGT 
TTTTTAAAAT TCATCACCTT TATCGCCACC ATTGCAGCCA TGGTCCAGGC CATTGAGATG 
GTCATCGACC GGTTTTCCCA GGGACTCTAC ACGGCCCTGG GCGTGTTCCT GCCCCTGATC 
GCGGTGAACT GCGCCATCCT GGGAACATCC CTCTTCATGG TGGAGCGCCA GTATACTTTT 
CTCGAATCCC TGGTGTTCGG CTTCGGCTCG GGCCTGGGAT GGCTGATGGC CATTGTCTCC 
ATGGCCGCCA TTCGCAAAAA GCTGCACTAC GCCGACATGC CCCACGGCCT GGAAGGATAC 
GGCATCACCA TGGTGGTGAC CGGGCTGATG GCCATGGCCT TTATGCTGTT TTCAGGAATC 
ACACTATGA 

 

Protein sequence

MQDLITIFLN SVFVGNILLA YFLGMCSFVA VSKNIHTATG LGFAVVFVLT ITTPLNWLVY 
TFLLAPGALA WAGLPNVDLS FLKFITFIAT IAAMVQAIEM VIDRFSQGLY TALGVFLPLI 
AVNCAILGTS LFMVERQYTF LESLVFGFGS GLGWLMAIVS MAAIRKKLHY ADMPHGLEGY 
GITMVVTGLM AMAFMLFSGI TL