| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2538 |
|---|
| Symbol | |
|---|
| ID | 5695389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3073927 |
|---|
| End bp | 3074670 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641265147 |
|---|
| Product | NADH:ubiquinone oxidoreductase, subunit C |
|---|
| Protein accession | YP_001530419 |
|---|
| Protein GI | 158522549 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
|---|
| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.645341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG CGTTAAAATC GATCGTGTTT GCCCTGGTAT TGTGCGTGGT GTGCAGCGCC
CTGCTCACCG GCGCGGCCGT TGGGCTCAAA CCCTACCAGC TGGCCAACGT GCGCATCGAC
CGGCAGAAAA ACATTCTAAA ATCCGCCGGC CTGCTGCGGG AGGACGAAAA GCAGACCCCG
GCAGAAATCG AGAAGCTTTT CAACGACCGC ATTCGGTGCC TGCGCCTGAC CCCCGACGGC
CGGCCCCTGG AACCGGGGGA AAGCCATGCA AAAGCCCTTC AGGTCTACCT GAATATCGGC
GCCGGCCAGA TGATTGAAAA CTACATCATT CCCATTGACA CAAAGGGGGT GTGGGGAGAA
ATCAAAGGAT ACCTGGCCCT TGCCGATGAC GGCAAAACCG TGTCCGGCTT TACCGTGTAC
CAGCATTCAG AGACCCCGGG CCTGGGCGGT GAAATCGAAA AGGCCTGGTT TCAGAAAAAC
TTCGTGGGCA AAAAAATCGT CAATGCCGCC GGCGACTTTG TCTCCGTTGC CGTTGCCAAG
GGCACGGTTA AAGATCAGGT GGCGCCGGAC CGGCAGGCCA ACTACGTGGA CGGCATCAGC
GGCGCCACCC TTACCGGACG CTACCTGAGC AAAGGTCTGG AGACGATTCT GCGCGAATAT
GAACCGGTAT CGGTAAAGTT TCGCAAGGAT CATTTTAAAA TGGTGCCCCC GGACCAGGGG
ACATGTGACA AGAAGTCAGG ATAA
|
|---|
| Protein sequence | MSDALKSIVF ALVLCVVCSA LLTGAAVGLK PYQLANVRID RQKNILKSAG LLREDEKQTP
AEIEKLFNDR IRCLRLTPDG RPLEPGESHA KALQVYLNIG AGQMIENYII PIDTKGVWGE
IKGYLALADD GKTVSGFTVY QHSETPGLGG EIEKAWFQKN FVGKKIVNAA GDFVSVAVAK
GTVKDQVAPD RQANYVDGIS GATLTGRYLS KGLETILREY EPVSVKFRKD HFKMVPPDQG
TCDKKSG
|
|---|
| |