| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2535 |
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| Symbol | |
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| ID | 5695386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3069486 |
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| End bp | 3070991 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641265144 |
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| Product | amidase |
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| Protein accession | YP_001530416 |
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| Protein GI | 158522546 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0740516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGAT TTTCCGATTA TGACATGTAC GATGCCATGG GACTGGCGCA ACTGGTCCGC
GATAAGGAGA CCACGGCTCT GGAGCTGTGC GAGGCGGCCA TTGCCCGGAT CGAGGCCATC
AACCCGAAGA TCAACGCCGT GATTCACGCC ATGTTTGACA AGGCCCGGCA GGCCGCTGCC
GGGTCCTTGC CTGATGGCCC TTTTACAGGG GTCCCTTTTC TGTTAAAGGA CCTGCTGGCC
GCCTATGCCG GAGAGCCCTT TACCCAGGGG TGCCGGGGGT ACCGGAATTT TATACCCGAT
CACGACAGCG AACTGGCGCG GCGTTACAAA AAGGCGGGCC TGGTGGTGCT GGGAAAGACC
AACACCCCGG AGTTCGGCCT GCTGGGGGTC ACCGAGCCGG AACTGCACGG CCCCACCCGC
AACCCCTGGA ACCCTGAACG GTCGCCGGGC GGGTCTTCCG GCGGATCGGG CGCTGCCGTG
GCCTCGGGCA TGGTGCCCAT GGCTTCGGGC GGCGACGGCG GCGGCTCCAT TCGGATTCCC
TCGGCTTGGT GCGGCCTGTT CGGCCTCAAG CCGAGCCGGG GTCGGGTGCC CGCGGGGCCG
GACAGTGGCG AACTGTGGCA GGGCGCGGCC CAGGAGCATG TGCTGACCCG ATCGGTGCGG
GACAGCGCCG CCATGCTGGA CGCCATTTGC GGACCGGAAC CCGGGGCCCC TTACGAAATT
CTGCGGCCCC AACGGCCCTA CCTGGAAGAG ACGGCAATCG CGCCGGAAAA GCTGAAAATC
GGTTTTAACA CAGTCTCTCC CATCGGCCTG CCGGTACATG ACGAGTGTAT CAAGGCCGTT
CACACGGCGG CCCGGCTGCT GGCGGACCTG GGCCATGTCG TGGAAGAAAA GGCCCCTGCC
ATTGACGGAT CGGCCCTGGC CCGAAGCTAT TTTGTGATGT ATTACGGCGA GGTGGCCGCC
GATATCGAGC AGATGGGAAA AGACCTGAAC CGCCGGGCCA CCCGCAGAGA CGTGGAGGCC
ATGACATGGA CCCTTGGCCG GTTGGGAAAG ACCTTTTCCG CCTGCGACTT TGTGAATGCC
AAGCGCCAGT GGAACAAGGC GGCCCGGGCC ATGGCCGATT TTTTTACCGG CTGCGATCTT
TACCTGATTC CCACCAACGC GCAGCTGCCG CCGGTCATTG GCGCCAACCG CCTTTCGGTT
TTCGAAAAGG CCGGGTCAGC GGTGATTCAC GCCCTGGGTC TGGAAAAGCT GCTGATCGCC
TCGGGCATGG TGGAAAAAAC CGGGTATCGC AGCCTGGCGC TGACGCCTTT TACCCAGCTG
GCCAACCTGT GCGGCCTGCC CGCCATGTCG GTGCCCCTGC ACTGGAGTGC CGACGGGCTG
CCCTGCGGGT GCCAGTTCGT GGCGCCCTTT GGCCGCGAGG ACATGTTGTT CCGGCTGGCC
GGACAGCTTG AGCAGGCCGC GCCCTGGCGC GACAGGATAC CGCTGGTGCA TGCCACCCGG
ATGTAA
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| Protein sequence | MQGFSDYDMY DAMGLAQLVR DKETTALELC EAAIARIEAI NPKINAVIHA MFDKARQAAA
GSLPDGPFTG VPFLLKDLLA AYAGEPFTQG CRGYRNFIPD HDSELARRYK KAGLVVLGKT
NTPEFGLLGV TEPELHGPTR NPWNPERSPG GSSGGSGAAV ASGMVPMASG GDGGGSIRIP
SAWCGLFGLK PSRGRVPAGP DSGELWQGAA QEHVLTRSVR DSAAMLDAIC GPEPGAPYEI
LRPQRPYLEE TAIAPEKLKI GFNTVSPIGL PVHDECIKAV HTAARLLADL GHVVEEKAPA
IDGSALARSY FVMYYGEVAA DIEQMGKDLN RRATRRDVEA MTWTLGRLGK TFSACDFVNA
KRQWNKAARA MADFFTGCDL YLIPTNAQLP PVIGANRLSV FEKAGSAVIH ALGLEKLLIA
SGMVEKTGYR SLALTPFTQL ANLCGLPAMS VPLHWSADGL PCGCQFVAPF GREDMLFRLA
GQLEQAAPWR DRIPLVHATR M
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