Gene Dole_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2528 
Symbol 
ID5695378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3061251 
End bp3061865 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content57% 
IMG OID641265136 
Producthypothetical protein 
Protein accessionYP_001530409 
Protein GI158522539 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.938301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGC ACCTTTCTCC CACCCCGTAC ATGGACTTCG ACGTTCCCGA GGTGATGGAT 
TTTGCAAAAA CCGCCGGCAA AGGCGCCACT GCCAAAGACA AGGCGGTAAA CCTCTATTAT 
GCCGTGCGGG ACGGGTTTCC CTACAATCCG TATGCTTTCA ACTTTGAGCG GGAAAATTAT 
AAGGCCAGCT TTACCCTGGC CGCCGGCGAG GGGTTCTGCA TTCAGAAGTC GATCCTTCTG 
GCCGCCGCAG CCCGTGCCAT GGGCATTCCG GCGCAACTGG GCTTTGGCAA CGTGGTCAAC 
CACCTGGCCA CGGAGCGGCT GAAAAAGCTC ATGGGCGGGG ACCTTTTTGT CTTTCACGGC 
TACACCGTGC TCTGGATCGA CGGCCGGTGG GTCAAGGCCA CCCCTGCTTT TAACCGGGCC 
ATGTGCGATA AATTCAATAC CCGCCCCCTG GAGTTTGACG GGGCAAACGA TTCCGTGTTT 
CATCCCTACG ACAACAGCGG CAACCAGCAC ATGGAGTATG TGCATGAATA CGGGGCCTTT 
GACGACATGC CCTTTGACCT GATGATTGCC GAGATGCGTA AGTACTATCC CCAGTGGTTC 
GGCGAGGCGG TGTGA
 
Protein sequence
MDQHLSPTPY MDFDVPEVMD FAKTAGKGAT AKDKAVNLYY AVRDGFPYNP YAFNFERENY 
KASFTLAAGE GFCIQKSILL AAAARAMGIP AQLGFGNVVN HLATERLKKL MGGDLFVFHG 
YTVLWIDGRW VKATPAFNRA MCDKFNTRPL EFDGANDSVF HPYDNSGNQH MEYVHEYGAF 
DDMPFDLMIA EMRKYYPQWF GEAV