| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2509 |
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| Symbol | |
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| ID | 5695359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3039213 |
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| End bp | 3039896 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641265117 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001530390 |
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| Protein GI | 158522520 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.567945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCC CGCAACAAAT CACTGCCCGG AAAGTTTGCC ACCTGCTCGA CCAGGTGGCC
CGGACCCTTC AATTTTATAC GGATTCCGGC AGGAATGGCA TTGATTGCAG CCGGGAGGCC
CTTACAATGG CAACACAGTG GGACCGGCCC GGCTGCCTGG CGCCGGACCC GGGCACCGCG
GTCCGACAGG GGTGCGACCA GTGCCCTCTT GCATCCGCCG GCCCCAGCCC GGTCCATGGC
CGGGGGCCCT CACTGGCCCG GCTCATGGTG GTCAGCGACT CACCCCTGGG GGCCGGGGAT
CCGTTTTCCG GCAATGAGGG TGAGCTGTTT ACCCGCATTC TTTTGGCCAT GAAACTGGCT
CCGGACCGGG TGTTTGTCAC GGCCATGGTC CGTTGCCCCG TGCCTGAAAA CGCGAAGCCC
GCGCCCCGGG CCCTGGTTGC CTGCCGCGCT TTTCTGGAAG AAGAGATCCG CAAGGTCAAG
CCAACCGTGA TCTGGGTGAT GGGAGAGACC GCGGCCCAGG CCCTTCTTGG CGCGGACGAC
CCCCTGGACC ATCTGCGGGG CCGGTTTCAC GACTATCAGA ATATTCCTGT CATGCCGACC
TGGCATCCCC GGGACATCCT GTCCGACCCC TCCCTCAAAC GCCCGGTGTG GGACGATGTC
CAGCAAATCA TGAAGTTCCT GTAA
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| Protein sequence | MTTPQQITAR KVCHLLDQVA RTLQFYTDSG RNGIDCSREA LTMATQWDRP GCLAPDPGTA
VRQGCDQCPL ASAGPSPVHG RGPSLARLMV VSDSPLGAGD PFSGNEGELF TRILLAMKLA
PDRVFVTAMV RCPVPENAKP APRALVACRA FLEEEIRKVK PTVIWVMGET AAQALLGADD
PLDHLRGRFH DYQNIPVMPT WHPRDILSDP SLKRPVWDDV QQIMKFL
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