| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2495 |
|---|
| Symbol | hslU |
|---|
| ID | 5695345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3023953 |
|---|
| End bp | 3025323 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641265103 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_001530376 |
|---|
| Protein GI | 158522506 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC TGACACCAGC GGAAATTGTA ATCGAACTGG ACAAGTATAT CGTGGGCCAG
GCCAAGGCCA AGCGGTCCGT GGCCATTGCC CTGAGAAACC GGTGGCGGCG GCGACAGGTG
CCGGAGGCCA TGCGCGAGGA GATCGCGCCC AAGAACATCA TCCTGATCGG GCCCACCGGC
GTGGGCAAGA CCGAGATCGC CCGCCGCCTG GCCCGGCTGA CCGACTCGCC CTTTTTAAAG
ATTGAGGCAT CCAAGTTCAC CGAGGTTGGG TATGTGGGCC GGGACGTGGA GTCCATGGTC
CGGGACCTGG TGGAACTGAC CGTTACCCAC CTGAAGGTGT CGGAACGGGA GGCGGTGCGG
GAAAAGGCGG TCCGCCTGGC AGAAGAGCGG ATTCTGGATG TGCTTTTGCC CCGGCCGGAA
GGGCCCCAGC GGGCCGATGG GGATGAACCC CTGGGCTCTC ATATTGAAAT TGTTTCCGAT
GACGACGGCC GGGTATCGAC CCGGGAGAAG CTGCGCACCA TGCTGCGGGC CGGCAAGCTC
AAGGACCGGT ACGTGGACCT GGAACTGGCC GACCGGAGCA TGCCCATGGT GGAGATTTTT
TCCAACTCCG GCCTGGAGGA GATGGGGGTC AACTTCAAGG ACATGTTTGC CGGCCTGCTG
CCGAAGAACA AGAAGCGGCG CAAGGTCAAG GTGCCCGAGG CCCTGGAGAT GCTCACCGAC
GAGGAGGCCC AGAACCTGGT GGACATGGAC CGGGTGGTGC GCATGGCCGT GGAAAAGGTG
GAGCAGTCGG GTATCATCTT TTTGGACGAG ATCGACAAGA TCGTGGCCAC GAGCAAGGGC
TCCGGCCCGG ACGTGTCCAG GGAAGGGGTG CAGCGGGATC TTCTGCCCAT CGTGGAGGGC
AGCACGGTGA TGACCAAGCA CGGCGCGGTA AAGACCGACC ATATTCTGTT TATCGCGTCC
GGGGCCTTTC ACATGTGCAA ACCCTCGGAC CTGATTCCCG AGCTCCAGGG CCGGTTTCCC
ATTCGGGTGG AGCTGGACGC CCTGGGAAAA GAGGAGTTTT TCCGCATTCT CATCGAGCCG
GAAAACGCCC TGCTGCTGCA ATACATCGAG CTGCTGCGCA CGGAAGGGGT GGATGTGGCC
TTTGCCGATG AGGCGGTGCG GGAGATCGCG GCCATGGCCG AGGAGGTGAA CGCCGGCACC
GAGAACATCG GGGCCCGGCG GCTGCACACC CTGATGGAGT ACCTGCTGGA AGACCTGCTG
TTTGACGCGC CGGATCGGGC CGGCACAAAG GTGGCCATTG ACCGGGCCTA TGTGACCGAC
CGGCTGAAGA CCATTCGGGG CAACGAGGAC CTGAGCCGGT TTATTTTGTA A
|
|---|
| Protein sequence | MSDLTPAEIV IELDKYIVGQ AKAKRSVAIA LRNRWRRRQV PEAMREEIAP KNIILIGPTG
VGKTEIARRL ARLTDSPFLK IEASKFTEVG YVGRDVESMV RDLVELTVTH LKVSEREAVR
EKAVRLAEER ILDVLLPRPE GPQRADGDEP LGSHIEIVSD DDGRVSTREK LRTMLRAGKL
KDRYVDLELA DRSMPMVEIF SNSGLEEMGV NFKDMFAGLL PKNKKRRKVK VPEALEMLTD
EEAQNLVDMD RVVRMAVEKV EQSGIIFLDE IDKIVATSKG SGPDVSREGV QRDLLPIVEG
STVMTKHGAV KTDHILFIAS GAFHMCKPSD LIPELQGRFP IRVELDALGK EEFFRILIEP
ENALLLQYIE LLRTEGVDVA FADEAVREIA AMAEEVNAGT ENIGARRLHT LMEYLLEDLL
FDAPDRAGTK VAIDRAYVTD RLKTIRGNED LSRFIL
|
|---|
| |