Gene Dole_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2493 
Symbol 
ID5695343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3021686 
End bp3022879 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID641265101 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_001530374 
Protein GI158522504 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGTA CCAATATAAA GGAACAGGCG GACACGGTGT TTGCCAACAC TTACAAGCGC 
TTGCCTCTGG TGATTGAGCG GGGAGAAGGA TGTACCCTGT GGGACGCCGA TGGCAAGGCC
TATACCGATT TTTTTGCCGG CATCGCGGTG TGCGGCCTGG GCCATGCCCA TCCGGCTGTT
GCCGAGGCGC TTTATAAACA GGCGGGCACG TTGTGCCACG TCTCCAACCT GTTTTACACC
ACGCCCCAGA CCGAGCTGGC CGCTCTGCTG GTGGAAAAGA GTTTTGCCGA CCGGGTCTTT
TTCTGCAACA GCGGGGCCGA GGCCAACGAA GCGGCCATCA AGCTGGCAAG AAAGCATTTT
CACGACCGGG GCGAACATGA CCGGTACACC ATTGTGACCA TGGAAAAGTC GTTTCACGGC
CGGACCATGG GGGCCCTTTC CGCCACCGGC CAGGCAAAGA TTCAAAAAGG GTTTGAGCCT
CTGCTGTCCG GGTTTGTCAC CGTGCCCTTC AACGATATCG ACGCGTTGAA AAAGCAGATG
TCGCCGCGGA TCTGCGCCGT GATGATGGAG CCCATCCAGG GCGAGGGCGG GGTGGTCTGC
CCGTCGCCCG GTTATCTTGA GGCGGTGCGC AAACTGTGCG ACGAATCCGG GGCACTGCTG
ATCTTTGACG AGGTGCAGAC CGGCATGGGC CGGACCGGCA AGCTGTTTGC CCACGAGCAC
TTCGGCATCA CCCCGGACAT CATGACCCTG GCCAAGGCCC TGGGCAACGG CCTGCCCATC
GGCGCCATGC TGGCCACCGA GGCCGCTGCC TCGGCCTTTG TGCCGGGAGC TCACGCCACC
ACCTTCGGCG GCACGCCGGT AATCTGCGCG GCGGCCCTGG CCGTGCTGCG CACCATGGAC
CAGGAGAAGA TCGTGGCCCG TTGCGAAACC ATGGGCACTT ACTTTAAGGA GAAGCTCTCC
GCCCTTGTGT CAAAACATGG TTGCGTGACC GGTGTGCGGG GCATGGGCCT GCTGCTGGGC
ATGGAACTGA CCGGCGAGGG CGGCCCTGTG GTTTCCGCCT GCATGGAAAA GGGCTTTCTG
ATCAACTGCA TTCAGGACAG GGTGCTGCGG TTTGCCCCGC CCCTGATTGT AACAAAACAG
GAGATCGACC AACTGATCGC GTGCCTGGAC GAGGTGCTGG GCGATCTGTC CTGA
 
Protein sequence
MMSTNIKEQA DTVFANTYKR LPLVIERGEG CTLWDADGKA YTDFFAGIAV CGLGHAHPAV 
AEALYKQAGT LCHVSNLFYT TPQTELAALL VEKSFADRVF FCNSGAEANE AAIKLARKHF
HDRGEHDRYT IVTMEKSFHG RTMGALSATG QAKIQKGFEP LLSGFVTVPF NDIDALKKQM
SPRICAVMME PIQGEGGVVC PSPGYLEAVR KLCDESGALL IFDEVQTGMG RTGKLFAHEH
FGITPDIMTL AKALGNGLPI GAMLATEAAA SAFVPGAHAT TFGGTPVICA AALAVLRTMD
QEKIVARCET MGTYFKEKLS ALVSKHGCVT GVRGMGLLLG MELTGEGGPV VSACMEKGFL
INCIQDRVLR FAPPLIVTKQ EIDQLIACLD EVLGDLS