| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2490 |
|---|
| Symbol | |
|---|
| ID | 5695340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3017663 |
|---|
| End bp | 3019063 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641265098 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_001530371 |
|---|
| Protein GI | 158522501 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAA AACCATGGGG CGGGCGGTTT TCCGAGGCCA CCGACAAACA GGTGGAGGCG
TTTTCCGCCT CCATTGACGT GGATGCACGG CTCTACCGGT GGGACATTGA AGGCAGCATG
GCCCATTGCC GCATGCTGGC CCGGCAGGGC ATCATTCAAA AGAAGGAAGC CGACGCCATT
GTGGCCGGAC TTGCGGCCAT TCAAAAGGAG ATCGACGCCG GCACCTTTGT GTTTGATCCG
GCCCTGGAAG ATGTGCACAT GAACATTGAA CAGGCCCTGT TCGACCGTAT CGGGCCGGCG
GCCCGCAAGC TGCACACGGC CCGCAGCCGC AACGACCAGG TGGCCCTGGA TGTGCGGCTG
TTTCTGCGGG ACCGGACCCT TTCGGTTGTG GCCGGGCTGG TGGCTCTGCG GCAGCGGATC
GCGGATTTTG CCGGCGCGCA TATCGACGTG ATCATGCCGG GATATACCCA CCTGCAGCGG
GCCCAGCCCG TATTGTTCGC CCACCACCTG ATGGCCTATT ACGAGATGTT TTTCCGGGAC
ACCCAGCGGT TTGCCGAGGG CCTCAAGCGG ATCAACGTCC TGCCCCTGGG CAGCGCGGCC
CTGGCCGGCA CCCCCTATCC CATTGACCGG GCCTATACCG CCGAACTGCT GGGGTTTGAC
GCGGTGTCGG CCAACAGCAT GGACGCGGTG TCGGACCGGG ATTTTGCCAT CGAGTTTACC
GCTTCCGCCG CCATCTGCAT GATGCATTTT TCCCGGCTGG CCGAGGAGCT GGTGCTCTGG
TCCTCGTCGG AGTTCGGTTT TGTTGAGCTT TCCGACGCGG TTTCCACGGG CAGCAGCATC
ATGCCCCAGA AAAAAAACCC CGACGTGCCG GAGCTGGTCC GGGGCAAGAC CGGCCGGGTG
TTCGGCGACC TGATGGGCCT GCTGACCCTG ATGAAATCCC TGCCCCTGTG CTACAACCGG
GACATGCAGG AGGACAAACA CCTTCTGTTT GACGCGGCTG ATACCCTGTC CGCCTGCCTG
CCGGTCTGCA CCGCACTGTT CGACAACATG AAGGTAAACA ACGAGGCCAT GGCGCAGGCC
GCGGCCCGGG GCTACCTGAA CGCCACGGAC ATGGCTGACT ACCTGGTGGG CAAGGGCGTG
GCCTTCCGGG ACGCTCATGC CTGCGTGGGC AAGGCCGTGG CCGCAGCCAT CGCAAAAGGC
AGGGAGCTGC ACGAGCTGAC CCTGAAAGAG CTGAAAACTT TTTCCGCTGC CGTTGAAGCC
GATCTGTTTG ACGTGCTGGC CCCGGAAAAG GTGATTGAAC GGCGACAGGC GTTCGGCGGT
ACGGCCAAAA AAACGGTGCG GGCCGCCATT GCAGCGGCCC GGCGGCAGAT AAAAAAGGAA
AGAAAAACCT ATGGCCTGTA A
|
|---|
| Protein sequence | MTEKPWGGRF SEATDKQVEA FSASIDVDAR LYRWDIEGSM AHCRMLARQG IIQKKEADAI
VAGLAAIQKE IDAGTFVFDP ALEDVHMNIE QALFDRIGPA ARKLHTARSR NDQVALDVRL
FLRDRTLSVV AGLVALRQRI ADFAGAHIDV IMPGYTHLQR AQPVLFAHHL MAYYEMFFRD
TQRFAEGLKR INVLPLGSAA LAGTPYPIDR AYTAELLGFD AVSANSMDAV SDRDFAIEFT
ASAAICMMHF SRLAEELVLW SSSEFGFVEL SDAVSTGSSI MPQKKNPDVP ELVRGKTGRV
FGDLMGLLTL MKSLPLCYNR DMQEDKHLLF DAADTLSACL PVCTALFDNM KVNNEAMAQA
AARGYLNATD MADYLVGKGV AFRDAHACVG KAVAAAIAKG RELHELTLKE LKTFSAAVEA
DLFDVLAPEK VIERRQAFGG TAKKTVRAAI AAARRQIKKE RKTYGL
|
|---|
| |