Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2484 |
Symbol | |
ID | 5695334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3014057 |
End bp | 3014998 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641265092 |
Product | peptidase M23B |
Protein accession | YP_001530365 |
Protein GI | 158522495 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAACG TTACTCCCCG ACGGGTCACC TTTTTTGTGA CAAGCAGCAC CGGGGCCCCG GTACGCCAGC TTACCGTTTC AAAACGGACG CTGTGGATTG CGGGTGTTGC CGCCTTTGTT TGCCTGATCG GCGCCGTGGC ACTTCTTGCG GACTACAGCC ACCTTCGCCG GACCGCCCTC AAGGTCCGGC ACCTGTCAAA GATGGTGGCC GACCAGGACG CGGAACTCTC CCGCCAGGAG GCCCGGATTC AGGATTTTGT ATCCCAGGTC AATGAGTTGA AGTCCCGGCT GGTGGTGCTT CACCAGTTTG AACAGAAGAT TCGGGTGATC GCCAACATGG AAAACGACGC GGAGGGCGGC AACCTGTTCG GCGTGGGCGG CGCCATTCCC GACGAGATCG GGCCGGCCGC TGCCCTGGAG GAGAGCCGGG GTACCATGCT GCGGGAGATG CACGCCCAGC TCAACGTGCT GGACACGGCC TTTTCCATGC AGAAGGACAA TTTTTCCTCC CTGCTGGACT ACCTTGAGGA CAAGCGGAAG CTTTTGGCTT CCACCCCGGC CATTCGGCCC ATCAACGGCG GGTGGATCAC ATCGCGTTTT GAGTACCGGA AATCGCCTTT CACGGGCCGC CGTGAGTTTC ACCAGGGCCT GGATATCGCC GCCCGCATGG GCACGCCGGT GGTGGCCACG GCGGACGGTG TGGTCCTTTT CAGCGGCAGA AAAGGCTCCC TGGGCAATGC CGTGATGATC GACCACGGCA ACGGCGTGAT TACGCGGTAT GGTCACCTTA GCGAGTGTTT CAAGAAGCGG GGGGAAACCG TTTCCCGGGA AGACGTGGTC GGTGCTGTCG GCAATACCGG TATTTCCACC GGGCCCCATC TTCACTACGA GGTCCGGATC AACGGCGTGG CAGTGAATCC GGAAAAATAT ATTCTCAACT GA
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Protein sequence | MRNVTPRRVT FFVTSSTGAP VRQLTVSKRT LWIAGVAAFV CLIGAVALLA DYSHLRRTAL KVRHLSKMVA DQDAELSRQE ARIQDFVSQV NELKSRLVVL HQFEQKIRVI ANMENDAEGG NLFGVGGAIP DEIGPAAALE ESRGTMLREM HAQLNVLDTA FSMQKDNFSS LLDYLEDKRK LLASTPAIRP INGGWITSRF EYRKSPFTGR REFHQGLDIA ARMGTPVVAT ADGVVLFSGR KGSLGNAVMI DHGNGVITRY GHLSECFKKR GETVSREDVV GAVGNTGIST GPHLHYEVRI NGVAVNPEKY ILN
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