Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2479 |
Symbol | |
ID | 5695329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3006878 |
End bp | 3007447 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641265087 |
Product | putative phytochrome sensor protein |
Protein accession | YP_001530360 |
Protein GI | 158522490 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGAC AGGTGGAGAG AAAGTTTTAC CTAAAGGAGT TCAAGGCGAT CAGCCGGGCC ATTTCCAATT ATGAAGACCT GAACCTGCTG TTTACCCATA TCGTGGAAGG GCTCTGCCGG ACCTTTTCTC TCAAGGGGTG CTGCATCATG CTGTTTGACG AGCGGGAGAA GCAGCTTTTC CGGGTGGCCA GCCACGGCCT GAGCGACGCC TACACCGGCA AGGGGCCGGT GGTCATGGAT GAGAAGTATT CGGCCTTTTT TACCAAGGAG CCGGTTTATA TTGAAGACAT GCAGGCCAGC CCCCTGATGC ACTACCCCGA GGCGGCCCGA CAGGAAGGCA TCAAGTCCAT GCTGTCGGTG CCCATTCTGT ACCGGAAAAA TGTGGTGGGC CTGCTGCGGA TGTATACGGA CCAGGTGCAG GAGTATCACG AGGAGGATGT GGATTCCATT TCTACCCTTG CCCTTCAGCT GGCCGTGGTG CTGGAGAAAA ACGGGCTGAA GAATTTTCTT GATGGGGTCA AGACGGTTCT GGGCAACATT CCGCCCCGGT TGCTGAAAGG GCTGTGCTGA
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Protein sequence | MIRQVERKFY LKEFKAISRA ISNYEDLNLL FTHIVEGLCR TFSLKGCCIM LFDEREKQLF RVASHGLSDA YTGKGPVVMD EKYSAFFTKE PVYIEDMQAS PLMHYPEAAR QEGIKSMLSV PILYRKNVVG LLRMYTDQVQ EYHEEDVDSI STLALQLAVV LEKNGLKNFL DGVKTVLGNI PPRLLKGLC
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