Gene Dole_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2479 
Symbol 
ID5695329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3006878 
End bp3007447 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID641265087 
Productputative phytochrome sensor protein 
Protein accessionYP_001530360 
Protein GI158522490 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAC AGGTGGAGAG AAAGTTTTAC CTAAAGGAGT TCAAGGCGAT CAGCCGGGCC 
ATTTCCAATT ATGAAGACCT GAACCTGCTG TTTACCCATA TCGTGGAAGG GCTCTGCCGG
ACCTTTTCTC TCAAGGGGTG CTGCATCATG CTGTTTGACG AGCGGGAGAA GCAGCTTTTC
CGGGTGGCCA GCCACGGCCT GAGCGACGCC TACACCGGCA AGGGGCCGGT GGTCATGGAT
GAGAAGTATT CGGCCTTTTT TACCAAGGAG CCGGTTTATA TTGAAGACAT GCAGGCCAGC
CCCCTGATGC ACTACCCCGA GGCGGCCCGA CAGGAAGGCA TCAAGTCCAT GCTGTCGGTG
CCCATTCTGT ACCGGAAAAA TGTGGTGGGC CTGCTGCGGA TGTATACGGA CCAGGTGCAG
GAGTATCACG AGGAGGATGT GGATTCCATT TCTACCCTTG CCCTTCAGCT GGCCGTGGTG
CTGGAGAAAA ACGGGCTGAA GAATTTTCTT GATGGGGTCA AGACGGTTCT GGGCAACATT
CCGCCCCGGT TGCTGAAAGG GCTGTGCTGA
 
Protein sequence
MIRQVERKFY LKEFKAISRA ISNYEDLNLL FTHIVEGLCR TFSLKGCCIM LFDEREKQLF 
RVASHGLSDA YTGKGPVVMD EKYSAFFTKE PVYIEDMQAS PLMHYPEAAR QEGIKSMLSV
PILYRKNVVG LLRMYTDQVQ EYHEEDVDSI STLALQLAVV LEKNGLKNFL DGVKTVLGNI
PPRLLKGLC