Gene Dole_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2472 
Symbol 
ID5695321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2997559 
End bp2999082 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content60% 
IMG OID641265079 
Productradical SAM domain-containing protein 
Protein accessionYP_001530353 
Protein GI158522483 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTATTA CCCTGATCAA TCCCCCGGCC CTGGTGGCCC GGTACAACTA CTCCACCCTC 
AGCCACCCGC CCCTTGGCCT GGCCTGCATC GCGTCGTTTC TTGAGCAGCA GGACCACAAC
GTACACATCA ATGACGCCAT CGGGCAGGCG ATTGACCGGT TCGTGGCATA TGAACCGGCC
CCGGGGTTTT TTGTGCAGGG GCTCTCCTTT GAATCCATTA TCAGCCGAAT CCCTTCCCGC
TCCCGGATCA TCGGATTTTC CTGCCTGTTC ACCCACGCCT GGCCCCTTGT CCGGGAACTG
ATTGCCGCCG TCAGGCGGGC CTTTCCCCAC GCGTACCTGG TTGCCGGCGG AGAACACGCC
ACCGCCATGG CCGACATCTG TCTGGCCCAG TCGCCCCTGG ATCTGTGTAT TATGGGTGAA
GGGGAAGAAA CCATGGCCGG CGTGGTCCAG GCCGTTGAAG AGGGGCTTCC CCTGGACAGC
GTTCCGGGTG TCGCCTTTCT GGACCGCACC ACCGGCCGAA TCATCGAAAC CCGCCGCCGG
CCCCGTATAC GGAATTTAAG CCGTCTGCCC CGGCCGGCCT GGCACAGGGT ATCCCCCCAT
GTTTACCGGA TATACGAAGG GGCCGCCACC GGCCCTACCA TGCCCATGAT CGGTTCCAGG
GGGTGTCCTT TTAAATGCCG GTTCTGCGCC GCGCCCAACA TGTGGGGCCA CTGCTGGAAA
AAACGGGAGC CTGCCGATAT CGTGGATGAA ATGGAAGACT ATGCAAAACG GTTCGGCACA
AGGGAATTTC AGTTTTTCGA CATCAGCCCG TTTCTCAGTA AGCCCTGGAC CCGTGCCCTG
TGTCAAGAAA TCATCGACAG GGGCCTGAAA GTGGCCTGGC AGGCTCCGGC AGGGGTGCGG
GCCGAGGTGA TTGACCAACA GATGGCCGCC CTTCTGGTGG CATCAGGTCA TACCCGGATT
CAGTTTGCCC TGGAAAGCGG CAGCCCGGCC GTGCGAAAGG CCATGAACAA AAAAATCGAC
ATTCACCGGT TCGAGGCCGG GTTGACCGCC GGGCTCTCAT CGGGCATGAA GGTCTGCGTG
CTTTTCATTA TCGGGTATCC TGGCGAAGCC CTTTCCGATG TCCGCATGAC CTTCAGAAGC
ATTCGGCGTC TGGCAATCAA GGGGGTGCAT GAAATCGCCG TCTCAACCTT TCTGCCCCTT
CCCGGTACCG CCATATTTGA TGAGCTGCGT AAAAAAGGAC AACTTGCGAT CAACGATGAT
TACTGCCTGA AGATGGCCGA CGCCACGGCC CTGACCCATG CCACCTCGTG GAACCCCCTG
TTTTCGAACC GCCAACTGCT GCTGCTCAAG TGGCTGGGCA TTCTTCAGTT TTACGGTTTA
TCGTTTCTGC TGCATCCCTC CCGGGGATTT CGCACACTCC GGAACCTGGT CCGGGGGGTT
CAGGAGTCCA AAACCGACCG GGCCATTGCC GAAATCCGGC AAAAACTGGC CCTCCACCGG
GCCGGAAAGG ACCGGCGGCC GTAA
 
Protein sequence
MIITLINPPA LVARYNYSTL SHPPLGLACI ASFLEQQDHN VHINDAIGQA IDRFVAYEPA 
PGFFVQGLSF ESIISRIPSR SRIIGFSCLF THAWPLVREL IAAVRRAFPH AYLVAGGEHA
TAMADICLAQ SPLDLCIMGE GEETMAGVVQ AVEEGLPLDS VPGVAFLDRT TGRIIETRRR
PRIRNLSRLP RPAWHRVSPH VYRIYEGAAT GPTMPMIGSR GCPFKCRFCA APNMWGHCWK
KREPADIVDE MEDYAKRFGT REFQFFDISP FLSKPWTRAL CQEIIDRGLK VAWQAPAGVR
AEVIDQQMAA LLVASGHTRI QFALESGSPA VRKAMNKKID IHRFEAGLTA GLSSGMKVCV
LFIIGYPGEA LSDVRMTFRS IRRLAIKGVH EIAVSTFLPL PGTAIFDELR KKGQLAINDD
YCLKMADATA LTHATSWNPL FSNRQLLLLK WLGILQFYGL SFLLHPSRGF RTLRNLVRGV
QESKTDRAIA EIRQKLALHR AGKDRRP