| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2470 |
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| Symbol | |
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| ID | 5695319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2993656 |
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| End bp | 2995401 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265077 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530351 |
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| Protein GI | 158522481 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTGT TCTCCCATGC CCGTTTTGTA AAACCCGCTG TTTTCATTGC CGCCCTTCTT
GCGCTGGCTG TGTGTGCCGT TTATATTCAG ACCCTTTCCT TTTCCTTTAT CGGATTTGAC
GACCCCGACC TGATCATCAA CAATATCCAT GTGCGGGCCG GCCTGACAGC AGACAGTCTG
GCCTGGGCCT TTGGATCGGC CTGGCGGGAG AATGTGTTTT TCTATCCGTT GGCCATCGTC
TCCCACATGG CAGACGTTTC CCTGTTCGGC CTTGACGCCG GGGGCCACCA TCTTTCCAGC
ATGGTGCTTC ACGCCGGTAC GGTGCTGGGG CTCTTTTTTC TGCTTTTCTC CCTCACCGGC
GCTGCCTGGC GATCCGGTTT CGTGGCCGGT GTCTTTGCCG TTCACCCCCT GCCCGCCGAC
TCCGTGGCCT GGGTGGCAGA GCGGTCCAAT GTGCTGTGCG CTCTTTTCTG GATGGCAACC
ATGCTGGCCT ATGTGGGCTA TTGCCGGGCC GGCCGGCGCA AACCCGCCTG GTATCTTTTC
TGCCTGGTTC TTTTTGTCCT GGCCCTGCTG GCCAAGCCGG TCGCCGTGAC CCTGCCGGTG
GTCCTGCTGG CCGCCGACTG GCTGGTGCTG GACCGCTTCA AAAAAAACCC GGCAACCGGC
CGGCAACCAG GCTTTTGGCC GGTGCTGGGT GAAAAAATTC CCTTTCTGGT GCTTGCGGGC
CTGCGGGCCG GCGTCAACAT TGTCGTACCC GTGGCCACCG GCACCGCCGT CTCCGCCGCC
CACACGCCAA CAGGACTTCG TTTCGCCAAC GGCCTGGCCG TGATTCCGGT CTATATCCGC
CGGCTGTTTG CGCCGTATGA TCTGTCGATC TATTATCCTT TTCCCGGCAC CGTCGCGCTG
TGGAAACCTG CTGCGGCCCT GTTGCTGCTG GCCGTTGTCA CGGCCCTGCT GTTTTACCTG
CGGCGCAAAA AATCACTGGT GCTGTTCGGC TGGCTCTGGT TCCTGACGGT TCTGGTCCCG
ACGCTTGGCC TGATCCAGTC CGGGCCCTGG CCGGCCATGG CCGACCATTT TGTCTACCTT
CCCATGATCG GCCTGATTCT GGCAGCCACC TGGCTTGTGC CGGAAGAATG GACCTCCCCC
GGCGCAGGGC CGGCCAGATA TGTGTCGATC ATCGCCATTG CCGTGGTTGT GGCGACGGGT
GTGGCCGGCT TTTTTCATAC ACGGCACTAC AGAAACTCCA TCACGATTTT TGAGCAGGCC
GTAAAAGTGA CAGGCCGCAA TTTTTTCGCC CTGACCGGCC TGGGCAACGC CTACGCGGAA
CAGGGCCGGC CGGACAAAGC GGAAGTTTTT TTCAAAAAGG CCCTGCTCCT TCAGCCCGGC
TCGCCCGGGG CCCACGCCAA TCTCGGGCTG GTTGCCGCTG CTCAGGGGGC GGAACAAAAA
GCAAAAACCC ACTTTACCGC GGCCCTGGCC GTTGACCCCT TCTTTGCCCC GGCCCATGTC
GGTATGGGTA ACCTGCTGCT GGCCGCCGGC CGGCCCGAAG CCGCCATATT CCACTACCAG
CAGGCCCTGG CCACCGATCC GGACCTGGTA TCGGCCCACA ACAACCTCGC CCTGGCCCTG
GCCGCATCAG GCGCAACAGA CAAAGCCCTC AACCACCTCC ACAAGACAAT CCCGCGCTTT
CCCCACCGCC CCGAGCTTCG CCGGACCCTT GCCCGCCTGC TGGCGCGGAC CGGGGCCCGG
CGATAA
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| Protein sequence | MSLFSHARFV KPAVFIAALL ALAVCAVYIQ TLSFSFIGFD DPDLIINNIH VRAGLTADSL
AWAFGSAWRE NVFFYPLAIV SHMADVSLFG LDAGGHHLSS MVLHAGTVLG LFFLLFSLTG
AAWRSGFVAG VFAVHPLPAD SVAWVAERSN VLCALFWMAT MLAYVGYCRA GRRKPAWYLF
CLVLFVLALL AKPVAVTLPV VLLAADWLVL DRFKKNPATG RQPGFWPVLG EKIPFLVLAG
LRAGVNIVVP VATGTAVSAA HTPTGLRFAN GLAVIPVYIR RLFAPYDLSI YYPFPGTVAL
WKPAAALLLL AVVTALLFYL RRKKSLVLFG WLWFLTVLVP TLGLIQSGPW PAMADHFVYL
PMIGLILAAT WLVPEEWTSP GAGPARYVSI IAIAVVVATG VAGFFHTRHY RNSITIFEQA
VKVTGRNFFA LTGLGNAYAE QGRPDKAEVF FKKALLLQPG SPGAHANLGL VAAAQGAEQK
AKTHFTAALA VDPFFAPAHV GMGNLLLAAG RPEAAIFHYQ QALATDPDLV SAHNNLALAL
AASGATDKAL NHLHKTIPRF PHRPELRRTL ARLLARTGAR R
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