Gene Dole_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2461 
Symbol 
ID5695310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2979777 
End bp2981024 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content54% 
IMG OID641265068 
Productradical SAM domain-containing protein 
Protein accessionYP_001530342 
Protein GI158522472 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAAAAT ACTTTTTTTG GGATATTGTC GCAACAACCA TGATGACACT GGATCAAAAA 
AAACTCTACA GACTGCCCTG GGACCAACGC AACAGCCCTG GTGGATGGAT TGAAATAACG
GACCGGTGCG ATCTGTCCTG TCGCGGCTGT TACCGGCACA CCCTGGAAGG AGACCGGTCG
CTGGAGACCA TTTGCTCGGA TGTGGTGGCG CTTCAGCAGG CCCTTAACTG TGAAACCATC
GCCATTGCCG GCGGTGAACC CCTGCTGCAT CCCCGGTTGC CGGAAATCGT CAGCTTTATT
GCCGGGCGAG GGCTCAAACC CCGGCTGCTG ACAAACGGCC ACTGCCTGAC ACCTGAGCTG
GCCGCCACCC TGAAAAAGGC CGGCCTTGCC GCCTTCCATT TTCACGTGGA TTATCAACAG
AACCGGCCCG GTTGGACGGG GAAGGATGAA CAGGAGCATA ACACACTGCG CCAGCACTAT
GCCGACATGG TGTTCCAACT GGGTGGCGTG GAGTGCGGAT TTTATACAAC GGTCTATCGC
TCCTCCCTGG ATCAGATTCC CCATATCGTA AGGTGGCTTC ACAAAAATCC CCACAAAGTC
CAGCACCTCT CCCTGATCGT GTTTCGGGGG CTGCCGGACA CACCCGCCAT TACCTACCAT
GTCAACGGCC GGCCGGTGGA CATTCGTCAA ATGCGAACCC GGGTGGCGGA CACCCACGAG
ATTACCATCC GTTCCGAAGA TGTCTGGCGT ATTATCAATG ACCACTTCCC CGGTTCCTGG
CCCAGCGCCT ATACGCCAGG CACCGCGGCG CCGGAGACCT TCAAATTTCT TGTCATTCCT
TATATTGGCA GCAAAAAACA GATCTTCGGC ACCGCCGGCC CTGTCACAAT CAAAATGGGT
CTCTGGGTAC TGCGTCTTTT TTCTCGAAAA TATGCCATTG CGGCCCGCGA ATTCGGGGTG
GGGAAAAAAA TTTTTCTGTT TGCGCTGATC GACGGCCGAA TGCGTCAGGC ATTGAAAACC
TATCTGAAAT GCGTGATACG AAACCCCTCT GTTCTGGCTG AAAAAATCTA TACCCAGACC
ATCAACATTC AGCAGCCCCT GGAGGTTATC AGCGGCAAAA TGAACCTGTG TGACGGCTGC
GTCAACTACA TGCTCCACGA AGGAGAACTG GTCCATTCCT GCCGGCTGGA TGAATACAGA
ATGTTCGGCG GTCCTCTTGT GCCGGTACAA TCCGACGATC CACGATAA
 
Protein sequence
MSKYFFWDIV ATTMMTLDQK KLYRLPWDQR NSPGGWIEIT DRCDLSCRGC YRHTLEGDRS 
LETICSDVVA LQQALNCETI AIAGGEPLLH PRLPEIVSFI AGRGLKPRLL TNGHCLTPEL
AATLKKAGLA AFHFHVDYQQ NRPGWTGKDE QEHNTLRQHY ADMVFQLGGV ECGFYTTVYR
SSLDQIPHIV RWLHKNPHKV QHLSLIVFRG LPDTPAITYH VNGRPVDIRQ MRTRVADTHE
ITIRSEDVWR IINDHFPGSW PSAYTPGTAA PETFKFLVIP YIGSKKQIFG TAGPVTIKMG
LWVLRLFSRK YAIAAREFGV GKKIFLFALI DGRMRQALKT YLKCVIRNPS VLAEKIYTQT
INIQQPLEVI SGKMNLCDGC VNYMLHEGEL VHSCRLDEYR MFGGPLVPVQ SDDPR