Gene Dole_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2460 
Symbol 
ID5695309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2978654 
End bp2979766 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content54% 
IMG OID641265067 
Producthypothetical protein 
Protein accessionYP_001530341 
Protein GI158522471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTCTT TCATAAAAAT ATTTGCGGCC TGGCTGTTTG TATTCTGTCT GATGCTGATG 
GGAGCCGAGA TCGCCTTAAA AATCGGGGGG GTGCAGCCCT GGCGCCATAC ACTCCACCAG
GTGAAAACAT ATATACGGGG GCCGGTTATG CATATGGAGG ATGCCGGGCT GGGCTGGAAA
AACATGCCCG GCAGACATGT GCATCCCGGA TATTCAGATC TTACGGGACC GGTGATTACC
ACCTTCCTGG CAAACGGTGA ACGCATCACC CGGCCTTCGT CCAAAACGGG GGGCCCCTAT
CATGTTCTGC TGCTGGGCGG ATCTCTGACC TATGGCCGGG CCCTGAGCGA TGAGGATACG
TTCGCATGGC AACTGCAGGA AATGCTGCCC GAGGCTGATA TCCGGAACTT CGGTTGCGAC
GGGTATGGCA CCTACCAGTC CCTGCTTCTT CTGGAACATC TGACCACACA GTCACCAGCA
CCCGATCTTG TGATTTACGG CTTTTTTGAT GACCATGAAA ACCGGAATGT TGCCGCGTTT
TCTCATCTTC GCATGCTTGC GGAATATGCC CTCCAAACCC GCAAAACCGT TGCTGTCCCT
TACTGCACCA TCCAACACAA CGGCACACTG ACGCGTCATC CGCCCACCCA CTACCCATTT
TTCTCGTTAC GCGAGCACAG CGCACTGCTC ACGCTGGCTC AGGCATCCCT TTTAAAATGG
CGATTAAGCT CAAGAACCCG ACAAAAACGG GTTGTTACTG AAAAACTACT GCTGCAAATG
AAAGAAACAT GCAGAAAGAA CGGTGCCGAA TTCATAGTAA TCTTTTTGCA GGCGAATCCG
CCGGGCTATC ACCAATATCG GGCTTTTCTG AAGCAACATG CCATTGATTC CCTAGATGGC
AGGCTCCCTC TGACAGACCG GCTTCGCGTA CCCGGGGAAG GGCATCCCAA TGCCCTGGCC
AATCGATTCT GGGCTGAAGT CCTTGTGCCG ATCATATTGG ACCGTATTGC CTCGGAAGGG
ACAAAGCCGT CTGTTGGAAA AAGTCTCCGT GGGAAAGCAG TTGGCAGTAA TGGTATCCGA
CCTGGAACCG CGCGCGCCAC TTTCGGCAAC TGA
 
Protein sequence
MRSFIKIFAA WLFVFCLMLM GAEIALKIGG VQPWRHTLHQ VKTYIRGPVM HMEDAGLGWK 
NMPGRHVHPG YSDLTGPVIT TFLANGERIT RPSSKTGGPY HVLLLGGSLT YGRALSDEDT
FAWQLQEMLP EADIRNFGCD GYGTYQSLLL LEHLTTQSPA PDLVIYGFFD DHENRNVAAF
SHLRMLAEYA LQTRKTVAVP YCTIQHNGTL TRHPPTHYPF FSLREHSALL TLAQASLLKW
RLSSRTRQKR VVTEKLLLQM KETCRKNGAE FIVIFLQANP PGYHQYRAFL KQHAIDSLDG
RLPLTDRLRV PGEGHPNALA NRFWAEVLVP IILDRIASEG TKPSVGKSLR GKAVGSNGIR
PGTARATFGN