| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2458 |
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| Symbol | |
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| ID | 5695307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2973044 |
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| End bp | 2977153 |
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| Gene Length | 4110 bp |
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| Protein Length | 1369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265065 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001530339 |
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| Protein GI | 158522469 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00908706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG GGGATGACAC CTTCACCAAC TCCGGCACCA TTACCATGGG GGATATCGGC
TCTGCCGGCA TCTCCATGGC CGACGGGGAC GATACCGTCA CCAACACCGG CACCATTACC
ATGACAGACA TCGGTTCCAA CGGCATCACC ATGGCCGACG GAAAAGATGT GCTGACCAAC
TCCGGCCGGA TTGAAATCGA GTATGCCTCC ACCGGCGCCG TCACCATGGG CGATGGAGAC
GACACCCTGA CCAACTCCGG CACCATAACC CTGGACGAGT CCGGAAGCCA CGGTATCGCC
ATGGGATCTG AAAACGATAC CCTGACCAAC TCCGGCACCA TCACACTGGG CGACATCAGC
TCCGGCGGCA TCTCCCTGGC CAACGGCGAT GACATCTTCA CCAACACCGG CACCGTTACC
ATAGAGAGTA CCGGCGACGG CGGCATCTCC CTGGCCAACG GGGATGATAC CTTTGACAAC
GCCGGCACCG TCACCATGGG AGATATCGGC ACCACCGGCG TTACCATGGC CGACGGTGAC
GATGTGTTCA CCAACTCCGG CACCGTCACC ATCGGCGAGG CCGGCGACGG CGGTATTATC
ATGGCCGAAG GAAACGACAC ATTTACCAAC TCCGGCAAAA TCAGAATCGG TTCTGCCGGC
ACCGCCGGCA TCAACCTGGG CACGGGAAAC GACACATTTG ACAACACCGG CTGGATTCGA
ATCAATGATG CGGGGTCTCC CGGCATCAGC CTGGGCGATG GCCGTGACGT GTTCACCAAC
TCCGGCACCA TTATCATCGG CGAGGCCGGT TCTCCGGGCA TCAATCTGGG GGAGGATGAC
TCAGCCGACG AATACGGGGA TGACGACGCT TTCACCAACA CCGGCACCAT CGACATCGGA
AATGTCGAGT ACAACGGCAT CGGCATGGGT TATTACGGCG ACGACACCTT TGACAACGCC
GGTACCCTGA CCATCACCGA AGCCGGGTAC AACGGTATCA ACATGGGCTG TTACGGCGAC
GACACCTTTA CCAACTCCGG CACGTTGACC ATCACCGAAG CCGGGTTCAA CGGCATCCAC
ATGGGGGGCG GCGACGACGA AATCGCCGGT GACGGAGGCC TGGACTATTT TACCAACACC
GGCACCATCA CCATCGGCGC AACGGGCCAG TTCGGCATTC ACGCCGGTGA CGGCCCCAGT
TTTTTTGACA ACTCGGGCAC CATCACCATT GCCGGGGTCG CGGGTGCGTA TGCCAGCTAC
GGCGGCATCG GCATGGCCGG GGCAAACGAT ACACTGACCA ACACCGGCAC CATTGAGATC
GGCTACCTGG GTGGATCCGC GGCGGACTAT GCAGCCCCGG CCCCTCTTGA AGAAAACGGC
GTGATCGAGC CCACCTACAT CGGTCAGGCC TACAAAGGCA TTGTCATGGG GCCGGGTTCG
GACAAGCTGA TCAACTCCGG CGCCATTCGC ATCGGTTACA TGGGATCTGC GGGAGTTTCC
AGTTCCAAGG CATTGACCGA GGAGAGTGAC GGCGGCGACT ATTCCGGCAT CATCGGCGGA
CTGGGCAACG ACCTTATTGA CAACAGCGGT ACCATCGAGA TCGTCAAAAC CGACCACCAC
GGCATTGTCA TGGGCCAGCA CCAGGACACC ATTACCAACA CCGGCACCAT CACCATCGGT
GATACCGGTT ACGGTGCTAT CGCCATGAGC GACGGCGAGG ACACCTTTGA CAATGCCGGG
ACCGTCACCA TCGGGACCAG TGGATATGCA GGCATCTCCA TGGCCGACGG CCGGGACACC
TTCACCAATT CCGGCACCAT TGAGATCGGC GAGACCGGCC TTGAGGAAGA GGGTGGCTCC
GGCATCAGCA TGGGCGGCGA AAACGATGCG TTTACCAACA CCGGTATTAT CCGCATCGGC
ACATCTTACA ACACCGGCAT CACCATGGGA TGCGGTAACG ACACCTTTGA CAACTCTGGT
GCCATCCGGA TCCGTCAGAC ACTGACGGAT CCCGGCCTCA CCCTTGGCGA CGGAGACGAT
GTCTTTACCA ATACCGGTAC GATCCGCATC GGAACGGCTC AGGCCGATGT GGAAGAAGGG
GATTATGGCG CGGCCATTGC CATGGGCGGG GGTGATGACA CATTCACCAA CGCCGGCGAA
CTCTACCTTG GCGACGGCTT CTACAACATC ATCAAGGGCG GATGCGATGA CGACCTGCTG
ATCAACGAAG GGTACATCGA AGGCGGCATC GTCATGAGTG ACGGCGATGA CACGGTCATT
CTCCGCTCCG GATCAACGGT CACCGGCGCC ATCAACGGCC AGTGCACAGA CCCCGGCGAC
GCGGAGGGGA CCATCGACGG CGACCTGATT GTTCTGGAAG GCCAGGGTCT TCATAACAAT
GACATTCTCA ACTTTGACGT TCTGGAAAAG ACCGGAGACG GCACCTGGAC CGTTAGCGGC
CTTGTCACCG TGGACGACCT GGTGGACGTG CAGGCCGGCA CCCTGTTTCT CAACGACGAC
ATCAGCGGCT ATGACGGCAC GCCGGACATA GAAATCGCCT CAGGCGCCAC CCTGACGGCC
AACGGCATCA ACATGGACGG TGACGTGGAA AACAGCGGCA CCTTCAACCT GGGGGGCAAC
ATTCAGAGCA CCATGGTCAC CGGCGACTTC ACCAATGCCG CCGGCGCCAC CCTGGCCCTG
GGCCTGTCCG ACACCGGTGA GTGCGACAAC CTCACCGTGG GCGGCACAGC CGGCATCGAG
GGCGGCACCA TCCTGGTGAC ACCGGTAGGC GTTCTTCAGG ACGGTTCCAC TTATACCGTG
CTGACCGCCG ACACACTGGA CGGCGCGTTT GACCAGGCCA CGGCCAACTC CATGGTGCTG
AGCTTTGAGA TGGATGACGA GACGGAACCG AATTCCATTA TTCTGGAAAC CGACCGTCAG
TCCTATGCGG CGGCCCTGGC CGGCGCCGGC CTGACCGGTA ACCAGGCGGC CATGAGCCAC
GGCCTGATGC AGCTGATCAA CGACGCGCCC GACGGCGACC TGGCCGATGT GATCAACGCC
CTGGACCGGC AGCCGGATGC GGCCTCCCTG GCCAACGCGT TGGGCCAGCT GTCGCCTGAG
CTTTACACCC TGGGTACGGC CCTGACCGGC GTGAACACCG GTGGTTTTAC CTCCGGCATG
ACCGGCCGGC TTTCCGGCCT TCGCGTGGCC GCCACCAACC GGGCCACCGA GGCGGGGCCT
GTGCTGGCTG CGGTGCCTAC CGCGGACCGG CAGGCGGGCC AGGGCTGGAG TCCCTGGGCC
AAGGCCTTCT ATACCACGGC GGAGCAGGAC ACCACCACCG GGTTCATGAG CTACGACTAT
GACGCCATGG GACTTAGCGT GGGCATTGAC AAGGGTGTGG CCGACAACAT GGTTGTGGGC
GTGACCCTGG GAATCGCAAA GGCCGAGGCC GATGTCGACG CCAACATGGG TGAGCAGGAT
GTGGACACCT TTTCCATGGG GGCCTACGGC TCCTGGACCG GCGACAAGGT ATACGTGGAC
GGCGCCCTGC TTTTCGGCAT CAACTCCTAT GACGCCCTGC GCCACATTCC CATGCTGGGC
CTGACCGCGG CAGGTGATCA TGACGGCGTG GACTACTCCG CCTACATCGG CGGCGGTTAC
ATGGCTGCCA TGGGCGACTG GAACCTGATT CCCACGGCCA GCATGCAGTA CACCTTCCAC
GAGGAAGAGG GCTTTATTGA GACCGGCGCC GGGGCGGCAA ACCTTGCCGT GGACAAGACC
GACACCAGCT CCCTGCTGGG CAAGCTGGGC GTGCGGGTCA ACCGGCTCTT CCAGATGGGC
GACGGCATGG ACCTGAAGCC CGAGCTGAGC GTGCAGTGGG GCCATGAGTT TGCCGACCGC
GACCAGCAGG CCATGTCCTG GTTTGCCGGC ACCACCACCG GCGCCTTCAC GATCAACGGC
CTTGAGGCGA ATCGTGACAG CGGCATACTG GGGCTGAGCC TGACCGCCTT TATGGGCGAC
AGCCTCTCCC TGACCGCCGG TTACGAGGGC ACCATGAAGG AAGAGTTCGA AGCCCACACC
TTCACGGCCG GGCTTCGTTA CATGTTCTAA
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| Protein sequence | MADGDDTFTN SGTITMGDIG SAGISMADGD DTVTNTGTIT MTDIGSNGIT MADGKDVLTN
SGRIEIEYAS TGAVTMGDGD DTLTNSGTIT LDESGSHGIA MGSENDTLTN SGTITLGDIS
SGGISLANGD DIFTNTGTVT IESTGDGGIS LANGDDTFDN AGTVTMGDIG TTGVTMADGD
DVFTNSGTVT IGEAGDGGII MAEGNDTFTN SGKIRIGSAG TAGINLGTGN DTFDNTGWIR
INDAGSPGIS LGDGRDVFTN SGTIIIGEAG SPGINLGEDD SADEYGDDDA FTNTGTIDIG
NVEYNGIGMG YYGDDTFDNA GTLTITEAGY NGINMGCYGD DTFTNSGTLT ITEAGFNGIH
MGGGDDEIAG DGGLDYFTNT GTITIGATGQ FGIHAGDGPS FFDNSGTITI AGVAGAYASY
GGIGMAGAND TLTNTGTIEI GYLGGSAADY AAPAPLEENG VIEPTYIGQA YKGIVMGPGS
DKLINSGAIR IGYMGSAGVS SSKALTEESD GGDYSGIIGG LGNDLIDNSG TIEIVKTDHH
GIVMGQHQDT ITNTGTITIG DTGYGAIAMS DGEDTFDNAG TVTIGTSGYA GISMADGRDT
FTNSGTIEIG ETGLEEEGGS GISMGGENDA FTNTGIIRIG TSYNTGITMG CGNDTFDNSG
AIRIRQTLTD PGLTLGDGDD VFTNTGTIRI GTAQADVEEG DYGAAIAMGG GDDTFTNAGE
LYLGDGFYNI IKGGCDDDLL INEGYIEGGI VMSDGDDTVI LRSGSTVTGA INGQCTDPGD
AEGTIDGDLI VLEGQGLHNN DILNFDVLEK TGDGTWTVSG LVTVDDLVDV QAGTLFLNDD
ISGYDGTPDI EIASGATLTA NGINMDGDVE NSGTFNLGGN IQSTMVTGDF TNAAGATLAL
GLSDTGECDN LTVGGTAGIE GGTILVTPVG VLQDGSTYTV LTADTLDGAF DQATANSMVL
SFEMDDETEP NSIILETDRQ SYAAALAGAG LTGNQAAMSH GLMQLINDAP DGDLADVINA
LDRQPDAASL ANALGQLSPE LYTLGTALTG VNTGGFTSGM TGRLSGLRVA ATNRATEAGP
VLAAVPTADR QAGQGWSPWA KAFYTTAEQD TTTGFMSYDY DAMGLSVGID KGVADNMVVG
VTLGIAKAEA DVDANMGEQD VDTFSMGAYG SWTGDKVYVD GALLFGINSY DALRHIPMLG
LTAAGDHDGV DYSAYIGGGY MAAMGDWNLI PTASMQYTFH EEEGFIETGA GAANLAVDKT
DTSSLLGKLG VRVNRLFQMG DGMDLKPELS VQWGHEFADR DQQAMSWFAG TTTGAFTING
LEANRDSGIL GLSLTAFMGD SLSLTAGYEG TMKEEFEAHT FTAGLRYMF
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