Gene Dole_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2448 
Symbol 
ID5695297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2962653 
End bp2962991 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content60% 
IMG OID641265055 
Producthistidine triad (HIT) protein 
Protein accessionYP_001530329 
Protein GI158522459 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACT GTCTGTTCTG CAAGATCGCC GCCGGTTTAA TCCCCTGCGA CAAGGTCTAC 
GAGGATGATG ATTACGTGGC CTTTGCCGAC ATCAATCCCC AGGCCCCGGT GCATATTCTG
GTGGTGCCCC GGCGCCATAT CGCAAAAGTG GCCGACATGG CCCCGGCCGA TGGCAACCTG
GTGGGCGGCC TGTTTGACGT GGCGGCAAAG ATATGCGCTG AAAAGGGGAT CGCCGACTAC
CGGCTGGTGA TCAACAACGG CGCCGAAGCC GGCCAGTCGG TTTTTCATAT CCATCTTCAC
ATTCTGGCCG GCCGGTCTTT TGGCTGGCCC CCGGGGTGA
 
Protein sequence
MSDCLFCKIA AGLIPCDKVY EDDDYVAFAD INPQAPVHIL VVPRRHIAKV ADMAPADGNL 
VGGLFDVAAK ICAEKGIADY RLVINNGAEA GQSVFHIHLH ILAGRSFGWP PG