| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2443 |
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| Symbol | secF |
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| ID | 5695292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2953917 |
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| End bp | 2954960 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641265050 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001530324 |
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| Protein GI | 158522454 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000105757 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAA TCATCAAAGA CGGCACCACC ATCGACTTTG TGGGAAAACA GAAATACGCC
TTTGTGTTCT CCGCGGCGAT GATCCTTATC ACCATCATCT CTCTTGTGGC CCACGGCGGC
CCCAGGTACG GCATCGATTT TGCCGGCGGC ACCCTGGTGC AGGTCAAATT CGCCTCGCCG
GTGAGTACCA ATACCATTGC CTCGAGCCTG AAGACCGTGG GCATCGATGT TTCCACGGTT
CAGGCCTATG GCCACCCCAA AGAGGGGGAC TGCCAGTACC TTGTCAACAG CGCCATGGAC
ATGACCGGCA TATCGGGCGA CGACTTTGAA GACAAGGTAA AAACCGCCCT GGCCGGCGCC
ACCGGACAGA CCGCGGAGAT CACCAGGGTG GAGATGGTGG GCCCCACGGT GGGTAAAAGC
CTGAGGGGCA AAGCCTTGAT GGCCCTGTTT TTCTCGTTGC TGTTTATCAA TATCTATATA
TCGGGCCGGT TCGAGATGAA GTGGGTAGTG GCCGGCGTGG TGGCCGGGGG CCTGATCCTG
GCGGTGTGGC TCTTTTCCAT GCTGGGCATC AGCATTCCCT ACCTGATCCT GGTGGCCCTG
GTGGTCTCCC TGGTCCTTTT CTGGGTCCTT GAGCTAAAAT ACGCCATGGG CGCCATCGTG
GCCCTGATTC ACGACGTGAC CATCACGGTG GGTATTTTTT CCATCACCGG CAAGGAGTTT
TCCCTGCCCA TCATCGCGGC CCTGCTGACC ATCATCGGTT ATTCCCTCAA CGACACCATC
ATCGTGTTCG ACCGCATTCG GGAAAACCTG AAAAAGCTCT CCCGCAAATC CCTGCCCGAT
ATCATCAACA CCAGCATCAA CGAGACCCTG AGCCGGACCC TGCTCACCTC CGGCACCACC
CTGATTGTGG TAGCGGCCCT GTTTGTGTTC GGCGGCACCA TCATTCACGA TTTTGCCTTT
GCCATGCTTG TGGGCATCGG GGTCGGCACA TACTCTTCTA TTTTCGTTGC CAGCCCGATC
CTGCTTTTGT GGAAGAAAAA ATAG
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| Protein sequence | MFEIIKDGTT IDFVGKQKYA FVFSAAMILI TIISLVAHGG PRYGIDFAGG TLVQVKFASP
VSTNTIASSL KTVGIDVSTV QAYGHPKEGD CQYLVNSAMD MTGISGDDFE DKVKTALAGA
TGQTAEITRV EMVGPTVGKS LRGKALMALF FSLLFINIYI SGRFEMKWVV AGVVAGGLIL
AVWLFSMLGI SIPYLILVAL VVSLVLFWVL ELKYAMGAIV ALIHDVTITV GIFSITGKEF
SLPIIAALLT IIGYSLNDTI IVFDRIRENL KKLSRKSLPD IINTSINETL SRTLLTSGTT
LIVVAALFVF GGTIIHDFAF AMLVGIGVGT YSSIFVASPI LLLWKKK
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