Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2442 |
Symbol | |
ID | 5695291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2952318 |
End bp | 2953892 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265049 |
Product | protein-export membrane protein SecD |
Protein accession | YP_001530323 |
Protein GI | 158522453 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000311445 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAATT TCCAATGGAA ACAGGCCATC ACCCTGGCCG TTCTGGTGGC GGCCCTGATC TATGTTCTGC CCACCATCAA TCCGGAATGG TGGCCGAGAA AGACCATCAA CCTGGGGCTC GACCTTCAGG GCGGCATGCA CCTGATTCTT GAGGTGGAGA CCGAAAAAGC GGTGGAGGCC CAGATATCGG GCATTGGCCG GGACCTTGAA GAGACCCTGC GCAAAGAACG GGTCCGGCAT ACCGATGTAA CGGCAAAGGG CCAGAAAATC AGCGTCCTTG CAAGGGGCGA AGAGAACATC GAACGGTTCA AGCAGGTTCT GGACAAAGAT TTTGCCGGCC TGGCCATTGT CTCCTCGTCC AGGCGTGACA ACACCCTGGA GCAGGTGCTC GGCCTTCCCG ATGACGAGGT CGCCCACCTC AAGAAAATGG CCGTGGAGCA GGCCTTAGAG ACCATTCGCA ACCGCATCGA CCAGTTCGGG GTCAGCGAGC CCGTCATTCA TATTCAGGGC AGACGCCAGA TTCTGGTCCA GCTGCCCGGT GTTACCGATC CCCAGCGGGC CAAGGACCTG ATCGGCAAAA CCGCCCTGCT GGAGTTCCGG CTGGTGGATG AGGAAAACGA CGTGGCCAAA GCGGTAAGGG GCCAGGTACC GCCGGGCAGT GAACTGCTCT ACGAAGTCTC CACCGACCCG GATACCGGTC GAACCATCAA GTCCCCCCTG CTGATCAAGC GCGGCACCCC CCTGACCGGC GCGGACCTGT CCGATGCCCG GGTCCAGATC GACGCCCAGT ATAACGAGCC CTATGTTTCC ATCACCTTCA ATCGGAAAGG GGCCAATATT TTCGCGAAAA TCACCGAGGA GAACCTGAAA AAACGGCTGG CCATTGTCCT GGACAATCAT ATTCATTCGG CGCCGGTCAT TCAGGACCGG ATCACCGGCG GCGCGGCCCG GATCACCGGG AGTTTTTCCA TGGACGAGGC CCATGACCTG GCCATTGTGC TGCGGGCCGG GGCCCTGCCC GCACCGGTCA AAATTCTGGA AGAGCGGACC GTGGGGCCCT CCCTGGGCAA GGAGTCCATT GACAAGGGCC TGATGTCCAT GTACATCGGC GGCCTGATCG TGGTGCTCTT TATGGCGACC TACTACCGCA AGGCGGGCCT GATCGCGGAC GTCGCCCTGG TGTTCAATAT TCTGCTGATC GCCGCGGGCC TGGCGGCCCT GGGCGCCACC CTGACCCTGC CGGGCATTGC GGGTATCATT CTGACCATCG GCATGGCCGT GGACGCCAAC GTCATCATCT TTGAACGGAT CCGTGAGGAA ATACGGACCG GCAAGCCCCC CCGGGCCTCG GTGGCCGCCG GGTTCGACCG GGCCGCCCTC ACCATTCTGG ACGCCAACAT CACCACCCTG ATTGCGGCCG TGGTGCTCTT TCAATTCGGC ACCGGCCCGG TAAAGGGATT TGCGGTCACC CTGAGCCTGG GCGTGATGGC CAGCCTGTTC ACGGCCCTGG TGGTGTCCCG CCAGATATTC GACCTCATAT TGACCCGGCG CAAGGTCACG CACCTGAGCA TTTAA
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Protein sequence | MKNFQWKQAI TLAVLVAALI YVLPTINPEW WPRKTINLGL DLQGGMHLIL EVETEKAVEA QISGIGRDLE ETLRKERVRH TDVTAKGQKI SVLARGEENI ERFKQVLDKD FAGLAIVSSS RRDNTLEQVL GLPDDEVAHL KKMAVEQALE TIRNRIDQFG VSEPVIHIQG RRQILVQLPG VTDPQRAKDL IGKTALLEFR LVDEENDVAK AVRGQVPPGS ELLYEVSTDP DTGRTIKSPL LIKRGTPLTG ADLSDARVQI DAQYNEPYVS ITFNRKGANI FAKITEENLK KRLAIVLDNH IHSAPVIQDR ITGGAARITG SFSMDEAHDL AIVLRAGALP APVKILEERT VGPSLGKESI DKGLMSMYIG GLIVVLFMAT YYRKAGLIAD VALVFNILLI AAGLAALGAT LTLPGIAGII LTIGMAVDAN VIIFERIREE IRTGKPPRAS VAAGFDRAAL TILDANITTL IAAVVLFQFG TGPVKGFAVT LSLGVMASLF TALVVSRQIF DLILTRRKVT HLSI
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