| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2439 |
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| Symbol | |
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| ID | 5695288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2949534 |
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| End bp | 2951033 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265046 |
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| Product | ribonuclease |
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| Protein accession | YP_001530320 |
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| Protein GI | 158522450 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0019704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA AAATTCTTAT CAACGCCGTT GACACCGAAG AGTGCCGCAT CGCCAGGGTC
AAGGACAACC GGCTCTGCGA ATTTCACCTG GAAACCACCT CCCGGGTCAC CACGAAAAGC
AACATCTACA AGGGCCTGGT AGCGCGGGTG GAGCCGAGCC TTCAGGCGGT GTTTGTGGAT
TACGGGGAAG AGCGGCACGG GTTTCTTCAG AAGCACGACA TTCACACCGA CTATTTTCAG
GACAGCAAGG TGGACGGCTC CATTCGGGAC CTGATCAAGC CGGGCCAGGA GATGCTGGTC
CAGGTGGTCA AGGACCCGAT CATGCACAAG GGCGCGGCCC TGACCACCTT TCTTTCCATT
CCGGGCCGTT TCTGCGTATT GATGCCGGGC AGCGTCACCA AGGGGGTCTC CAAGCAGATC
GAAGACGAAG AGGAACGCAA ACGGCTCAAG GAAATCGTCA GCGGGCTCCG GGTGCCCGAA
AACTTCGGTG TCATTCTTCG CACCGCGGCA AAAGGGGCCG CCAAGACCGT TATCGCCAAG
GACCTGAGCT ATCTCATGCG GCTGTGGAAA ACCATCAAAA AAGAGGGCAT GAATCAGAAG
GCGCCGGCCG CCATTCACAA GGAGCGGGAT TTCGCGGTCC GGGCCATCCG CGACTACCTG
ACCGCCGATA TTCAGGAGAT TCTCATCGAC GAGCCGGCGG TTCACCAGGA GGTCAAGGAT
TTCGTGGCCC TGGTCTCGCC CAAACATGCC AAAATCGTCA GGCTCTACCA GGGCGCCAAG
CCCATCTTCA CCAAGCATGA ACTGGAAAGC CAGATCGAAT CGATTTTTGA AAACCGGGTT
CAGCTCCCAT CGGGCGGCTC CATCGTCCTG ACCCAGACCG AGGCCCTGGT CTCCATTGAC
GTAAACTCCG GAAAGTCCCG GCAGAAGCAC TCCATTGAGG AGACGGCCCT GCAGACCAAC
CTGGAGGCCG CCGAAGAGAT CGCCCGCCAG TTGAGACTCC GGGACATGGG CGGCCTGATC
GTCATCGACT TTATCGACAT GAAGCCGAGG AAGAACAACG CCGCCGTGGA GCGGGCACTC
AAAGCCCATG TCAAGGAGGA CAAGGCCCGG ACCGATGTGG GGAAAATCTC CAAGTTCGGG
CTTCTGGAGA TGTCCCGGCA GCGGCTTCGG CAGTCCATTG AAACCTCCAG CATGGTGACG
TGCGGCCACT GCGGGGGCCG GGGCTATGTC ATGGCCACGG AAAAACTGGG CATCAACGTG
CTGCGGCGGC TTCGGCTGGA GTCCCTCAAA CACCGGGGTG TGGCCGTCAC CGCCACGGTG
CCGGCGGTGG TGGCCGACTA CCTGCTCAAC AAAAAGCGCA CCGAGCTGCT GGAGCTGGAG
GCCCGCCGGG ACCTTGCCAT CACCATCACG GGAGACCCGG CCATGCACCT GGGGGAAAGC
GACATCCGGT TTGAAGGCAA GCCGAACGGC TCCGCCGATG GGGAGACAGA CCTCTCGTAA
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| Protein sequence | MTDKILINAV DTEECRIARV KDNRLCEFHL ETTSRVTTKS NIYKGLVARV EPSLQAVFVD
YGEERHGFLQ KHDIHTDYFQ DSKVDGSIRD LIKPGQEMLV QVVKDPIMHK GAALTTFLSI
PGRFCVLMPG SVTKGVSKQI EDEEERKRLK EIVSGLRVPE NFGVILRTAA KGAAKTVIAK
DLSYLMRLWK TIKKEGMNQK APAAIHKERD FAVRAIRDYL TADIQEILID EPAVHQEVKD
FVALVSPKHA KIVRLYQGAK PIFTKHELES QIESIFENRV QLPSGGSIVL TQTEALVSID
VNSGKSRQKH SIEETALQTN LEAAEEIARQ LRLRDMGGLI VIDFIDMKPR KNNAAVERAL
KAHVKEDKAR TDVGKISKFG LLEMSRQRLR QSIETSSMVT CGHCGGRGYV MATEKLGINV
LRRLRLESLK HRGVAVTATV PAVVADYLLN KKRTELLELE ARRDLAITIT GDPAMHLGES
DIRFEGKPNG SADGETDLS
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