Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2414 |
Symbol | |
ID | 5695262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2908334 |
End bp | 2910103 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641265020 |
Product | TPR repeat-containing protein |
Protein accession | YP_001530295 |
Protein GI | 158522425 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCA GAGAGGCTGT ATTGCCGAAC AAACCGGTCA AGAGAACGCG GTCCCTGGGT ACTCACGCGG GCGTCTGTCT GCTGCTGGCG GCGCTTTCCC TGGCTGTATT TCTGCAGATA CGGCATCATG ACGCCGTATC TTACGATGAT CCGATTGTCA CCGAAAACAG GCATATTCAG CAGGGACTCT CTTTTTCCTC CATTGTCTGG GCGTTCACGG ACGTTCCGGA CAATATGCCT TACTGGGTGC CTGTGGTGAT CCTTTCCCAC ATGGCGGACT TTCAACTTTT CGGGGACAAC TTCGGGCACC ACCACCTGAC CAGCCTGCTG TTTCATGTTC TCAGCGGCAT CACGCTGTTT CTTGCTCTGT CCCTGACCAC CGGCCGGTCG TTTCCGGCCG GTATCGCGGC GATGCTGTTT TCCATTCACC CGCTGAACGT GGAGCCCGTG GCATGGCTGG CGACCCGGAA CAGCGTTCTG GCTGTTTTTT TCGGCCTGCT GGCCGTGGCC GCCTACCTGT ATTACGCCCA TGGCCCTTCC TGGCGACGGT ATGCGACAGT ATTGCTGATG TTTGTCCTGG CCCTGGCGTC AAAATCCGAG ATAGCACCGC TGATCGCGGT GTTCTGCCTG CTCGACTTCT GGCCCCTGGG CCGCGCCGGC ACCGGTGGCG TGCCGGCGCG GCGCCTGGTG CTGGAGAAAA TTCCCTTTCT GGCAACGGTG GGCTGTGCCT TGCTGACAGG CCGGCTTCTG GGTGCCGAAG CCGGATCCCG CCCGCCTCTT CCCGGGCCCG GTGAATGGTT CCTGAAGACG GCCTCGTCTT ATCTGACCGC CATTGGAAGG CTCTTCTGGC CTGTTGACCT GACCCTTATT CGGCCGGCGC CTCCGGGATC AGAATCGTTG TGGCCCGCGG TCGCCGGAGT CATCATCCTG GCAGTCGTCA CGGTGGTCGT GATTCGGGCC CGCCGGTCCC GGCCCTATCT GCTGACGGGG TGGTTCTGGT TTGTTTTTTG CCTTGCGCCG GTTGCGGTCA TGATGGCCGG GTCGGGCCGT GTGCTGGCGG ACCGGCATAC CTATCTGCCC GCCATCGGGC TTTTTATCAT GGCCGGCTGG ATCGTCGCCG ACCTGGCGCA ACGGTTCCGG CGGTTTCGTC CCGCGGTTCT TTGCGTGACT GCCCCCGCCA TTATCGCTCT GGCACTTGTC TCCCACGCCC ATGTACGGCA TTTCCGGGAC AGTGAGACTC TTTATCGACA CGCGGCGGCC CTGCACCCCG GCAACATTCA GGCTGTCACC AACCTTGCCG ACACGCTTCT GGAAAAAGGC CGTATTGATG AAGCCATCGC CTTTTACCGG CAGGCGCTTT CCATGGATCC CGAAAACGCG CTGGTCCACA ACAATCTCGG CGCGGCGTTT TTGAAAGCGG GGGACCGCCA GCGGGCCGCC GCCGGTTTCC GGCAGGCCCT GAAATATGAT CCCGGCCACC CGATGGCCGG TAACAACCTG GGCAACCTGC TGGTTGAAAT GGGACGAACA GACGAGGCCA TTGCCTGTTT TGAAAAGACA CTGACCCCGG ACAACCCCTT TTTGTACAAA GCGCACAATA ACATCGCCAC GGCTTTTGCG CGCAAAGGAG AGTTTGACAA AGCGGTGTTT CACCTGCGTC AGGCCCTGGC CATTCAACCG GACTATGCCA CCGCAAGAGA AAACCTCGTC AGACTTCTGA TGATGCAGCA GCAGGGCGCC GCAGCTATCG GAGGAGATGG CGATCGTTGA
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Protein sequence | METREAVLPN KPVKRTRSLG THAGVCLLLA ALSLAVFLQI RHHDAVSYDD PIVTENRHIQ QGLSFSSIVW AFTDVPDNMP YWVPVVILSH MADFQLFGDN FGHHHLTSLL FHVLSGITLF LALSLTTGRS FPAGIAAMLF SIHPLNVEPV AWLATRNSVL AVFFGLLAVA AYLYYAHGPS WRRYATVLLM FVLALASKSE IAPLIAVFCL LDFWPLGRAG TGGVPARRLV LEKIPFLATV GCALLTGRLL GAEAGSRPPL PGPGEWFLKT ASSYLTAIGR LFWPVDLTLI RPAPPGSESL WPAVAGVIIL AVVTVVVIRA RRSRPYLLTG WFWFVFCLAP VAVMMAGSGR VLADRHTYLP AIGLFIMAGW IVADLAQRFR RFRPAVLCVT APAIIALALV SHAHVRHFRD SETLYRHAAA LHPGNIQAVT NLADTLLEKG RIDEAIAFYR QALSMDPENA LVHNNLGAAF LKAGDRQRAA AGFRQALKYD PGHPMAGNNL GNLLVEMGRT DEAIACFEKT LTPDNPFLYK AHNNIATAFA RKGEFDKAVF HLRQALAIQP DYATARENLV RLLMMQQQGA AAIGGDGDR
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