Gene Dole_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2414 
Symbol 
ID5695262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2908334 
End bp2910103 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content60% 
IMG OID641265020 
ProductTPR repeat-containing protein 
Protein accessionYP_001530295 
Protein GI158522425 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCA GAGAGGCTGT ATTGCCGAAC AAACCGGTCA AGAGAACGCG GTCCCTGGGT 
ACTCACGCGG GCGTCTGTCT GCTGCTGGCG GCGCTTTCCC TGGCTGTATT TCTGCAGATA
CGGCATCATG ACGCCGTATC TTACGATGAT CCGATTGTCA CCGAAAACAG GCATATTCAG
CAGGGACTCT CTTTTTCCTC CATTGTCTGG GCGTTCACGG ACGTTCCGGA CAATATGCCT
TACTGGGTGC CTGTGGTGAT CCTTTCCCAC ATGGCGGACT TTCAACTTTT CGGGGACAAC
TTCGGGCACC ACCACCTGAC CAGCCTGCTG TTTCATGTTC TCAGCGGCAT CACGCTGTTT
CTTGCTCTGT CCCTGACCAC CGGCCGGTCG TTTCCGGCCG GTATCGCGGC GATGCTGTTT
TCCATTCACC CGCTGAACGT GGAGCCCGTG GCATGGCTGG CGACCCGGAA CAGCGTTCTG
GCTGTTTTTT TCGGCCTGCT GGCCGTGGCC GCCTACCTGT ATTACGCCCA TGGCCCTTCC
TGGCGACGGT ATGCGACAGT ATTGCTGATG TTTGTCCTGG CCCTGGCGTC AAAATCCGAG
ATAGCACCGC TGATCGCGGT GTTCTGCCTG CTCGACTTCT GGCCCCTGGG CCGCGCCGGC
ACCGGTGGCG TGCCGGCGCG GCGCCTGGTG CTGGAGAAAA TTCCCTTTCT GGCAACGGTG
GGCTGTGCCT TGCTGACAGG CCGGCTTCTG GGTGCCGAAG CCGGATCCCG CCCGCCTCTT
CCCGGGCCCG GTGAATGGTT CCTGAAGACG GCCTCGTCTT ATCTGACCGC CATTGGAAGG
CTCTTCTGGC CTGTTGACCT GACCCTTATT CGGCCGGCGC CTCCGGGATC AGAATCGTTG
TGGCCCGCGG TCGCCGGAGT CATCATCCTG GCAGTCGTCA CGGTGGTCGT GATTCGGGCC
CGCCGGTCCC GGCCCTATCT GCTGACGGGG TGGTTCTGGT TTGTTTTTTG CCTTGCGCCG
GTTGCGGTCA TGATGGCCGG GTCGGGCCGT GTGCTGGCGG ACCGGCATAC CTATCTGCCC
GCCATCGGGC TTTTTATCAT GGCCGGCTGG ATCGTCGCCG ACCTGGCGCA ACGGTTCCGG
CGGTTTCGTC CCGCGGTTCT TTGCGTGACT GCCCCCGCCA TTATCGCTCT GGCACTTGTC
TCCCACGCCC ATGTACGGCA TTTCCGGGAC AGTGAGACTC TTTATCGACA CGCGGCGGCC
CTGCACCCCG GCAACATTCA GGCTGTCACC AACCTTGCCG ACACGCTTCT GGAAAAAGGC
CGTATTGATG AAGCCATCGC CTTTTACCGG CAGGCGCTTT CCATGGATCC CGAAAACGCG
CTGGTCCACA ACAATCTCGG CGCGGCGTTT TTGAAAGCGG GGGACCGCCA GCGGGCCGCC
GCCGGTTTCC GGCAGGCCCT GAAATATGAT CCCGGCCACC CGATGGCCGG TAACAACCTG
GGCAACCTGC TGGTTGAAAT GGGACGAACA GACGAGGCCA TTGCCTGTTT TGAAAAGACA
CTGACCCCGG ACAACCCCTT TTTGTACAAA GCGCACAATA ACATCGCCAC GGCTTTTGCG
CGCAAAGGAG AGTTTGACAA AGCGGTGTTT CACCTGCGTC AGGCCCTGGC CATTCAACCG
GACTATGCCA CCGCAAGAGA AAACCTCGTC AGACTTCTGA TGATGCAGCA GCAGGGCGCC
GCAGCTATCG GAGGAGATGG CGATCGTTGA
 
Protein sequence
METREAVLPN KPVKRTRSLG THAGVCLLLA ALSLAVFLQI RHHDAVSYDD PIVTENRHIQ 
QGLSFSSIVW AFTDVPDNMP YWVPVVILSH MADFQLFGDN FGHHHLTSLL FHVLSGITLF
LALSLTTGRS FPAGIAAMLF SIHPLNVEPV AWLATRNSVL AVFFGLLAVA AYLYYAHGPS
WRRYATVLLM FVLALASKSE IAPLIAVFCL LDFWPLGRAG TGGVPARRLV LEKIPFLATV
GCALLTGRLL GAEAGSRPPL PGPGEWFLKT ASSYLTAIGR LFWPVDLTLI RPAPPGSESL
WPAVAGVIIL AVVTVVVIRA RRSRPYLLTG WFWFVFCLAP VAVMMAGSGR VLADRHTYLP
AIGLFIMAGW IVADLAQRFR RFRPAVLCVT APAIIALALV SHAHVRHFRD SETLYRHAAA
LHPGNIQAVT NLADTLLEKG RIDEAIAFYR QALSMDPENA LVHNNLGAAF LKAGDRQRAA
AGFRQALKYD PGHPMAGNNL GNLLVEMGRT DEAIACFEKT LTPDNPFLYK AHNNIATAFA
RKGEFDKAVF HLRQALAIQP DYATARENLV RLLMMQQQGA AAIGGDGDR