Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2412 |
Symbol | |
ID | 5695260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2905789 |
End bp | 2906478 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641265018 |
Product | glycosyl transferase family protein |
Protein accession | YP_001530293 |
Protein GI | 158522423 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAC TGGTCATCAT TCCTTGTTAC AATGAAGAAA AAACCGTTGG CGCTATTGCC GAGGCGGCCA GGCCCCACGC CGACCTGTGC TTTGTTAATG ACGCCAGCAC GGACCAGACC GGCGACCGTC TGCATGCCAT TTCCGGCATT CACATCATCA CCCACGCCAG GCGCACCCAC ATTCCCGGCG CCATTCTCGA CGGCATGCGG TTTGCCGCGG ACAACGGCTA CGACGTTGCC GTGACCATGG ACGCGGGGCT CTCCCACGAC CCGAAGGACC TGCCCCGGTT TTTTGAGCAT GACGGGTACG ACCTTGTCAT CGGGGCAAGA CGGAAAACCA TTGGAACTCC GGCCCACCGG AAACTGATTT CCCAATGCGC GGCCCGCATC GTCAACTACG GTCTTTCAGA TACCTGGCAT GATCTGAAAG GACCGGCCTT TTCAGACTGC ACGTCCGGGT TCAGAATGTA TTCAAAAAAA GCGCTGCAAA CGGTTCTGAA TGCTTCCCTT GCATCAAGAT CCTTCGGATT CCACATGGAG ACCCTTGCTG TAATATACAC CCACGGACTT TCTATTCAGG AAATCCCCGT CACCTACACG TTTACCAACA GCTCCTTCAA TTCGGCGGCT GTGGGGGACG GCCTGCGTGT GGGAATCGGT CTTATCCGAA AAAAAATCGA CAACGGATAG
|
Protein sequence | MKRLVIIPCY NEEKTVGAIA EAARPHADLC FVNDASTDQT GDRLHAISGI HIITHARRTH IPGAILDGMR FAADNGYDVA VTMDAGLSHD PKDLPRFFEH DGYDLVIGAR RKTIGTPAHR KLISQCAARI VNYGLSDTWH DLKGPAFSDC TSGFRMYSKK ALQTVLNASL ASRSFGFHME TLAVIYTHGL SIQEIPVTYT FTNSSFNSAA VGDGLRVGIG LIRKKIDNG
|
| |