Gene Dole_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2392 
Symbol 
ID5695240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2882031 
End bp2883539 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content57% 
IMG OID641264998 
Producthistidine kinase 
Protein accessionYP_001530273 
Protein GI158522403 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCT ATAGAGAGAT GCTCAGTTCC TGGTCAAACG ACTACAGCAG CGAGCCGGAA 
AACATACCCC TGCACCGGCG TCCGTCGATC AGCATTCGGC TGAAGGTGGC GGTTTCGTTT
TTTCTCTTTT TTATTCTCTC CCTGACCGTG ACCGGCTGGT CCTACTGGAT TCTTACAAAA
CTTGAGCACA AGATAAACTT TCTGGAGGTG GCGGACAGCT ACCTGGTGGA GATTCAACAG
GCCCGGCGGT TTGAAAAAAA CTACCTGCTC TACGGCACCG GCCTGCAGGA GGCCCATGAA
CACCTGGAGG TGGCGGACGC CATCCTGACA AACAACACCG CGACAATTGA AAAGATCCTG
GGCCGGGAGC ACTACCGCAC CATGTCCACC CTGGTGGCGG CATACCACGA GCAGCTGGTG
CTGCTGGGCC GGGCCGGGAA TGAGACCGCA CAGGAGCGAA TCGTTCCGGA CCTGCGCGAG
TTCGGGGGCC AGATGGTGGC CTTTGCCGAA GATTTCGTGG AAAAAGAGCA GAAATCGGTC
CGCCGCATGT TCCTTCTGGC CAAGCGCGTG CCCCTTTACT TCATGTCCGT TGTGTTTGTG
TTGATGGTGT TTGTGACGGT TTTCCTGACC CGGCAGTTGG TGTTGACCCT GAACCGTTTC
ATGGAGTATA CCCGGCGGAT CGGGGAGGGT GACTTTTCTC CCATTCTGCC GGCCCGCAAA
TACAAGGATG AGTTTACCAA GCTGGCCGAG GCTTTCAACC ACATGATCAA GGAGTTGGAC
CACAAACACA AGGTGCTGCT GGAGTCCCAC AAACTCCGGG CCATCGGCAC GCTTGTGGCG
GGCGTGGCCC ATGAACTCAA CAACCCCCTC AACAACACCC TGCTGACCGC GTCCATGCTG
ACCGAGGATT TTGCCACCCT CTCCGACCAG GAAAAACTCG ACATGGTCAA CGATGTGATC
AGCGAAACCG AACGGGCACG GCGGGTGGTG AAAAACCTTT TGGACTTTGC CAGGGAAGGG
GAGACACAGC TGGCCCCCCT GGAGATGGAC AAGATCGTGG AGGATTCAGC CCGGCTGGTG
GCCAACCAGG TCAGGTTCGC CAAGGTGGAG CTGACGGTCT CCTGCGAGCC CAACCTGCCC
CGGATTCACG GGGATGAACA GAAACTCAAA CAGGTTTTTG TCAACCTGAT TCTCAATGCC
GTGGATGTGC TGCCTCCGGG CGGGCAGATT CACGTCAAGG TGGGGAAAGA CAAGATGCCC
GGTTATGTGC TGGTGACGGT CAGCGACAAC GGGCCGGGCA TTCCCGAGCA TATTCAGGGC
CGCATTTTTG AGCCTTTTTT CACCACCAAG GGCCAGGGAA AGGGCACCGG CCTGGGCCTG
TCCGTTTCCC GGGGCATTAT CAAGAAACTG GGCGGCTATA TCCACCTCAC CAGCAGTCCT
GGCCAGGGCA CCACATTTAC GGTGTCGCTC CCCACCACCG AATCGCCGTC AGAGATCATG
TCAAAATAG
 
Protein sequence
MRRYREMLSS WSNDYSSEPE NIPLHRRPSI SIRLKVAVSF FLFFILSLTV TGWSYWILTK 
LEHKINFLEV ADSYLVEIQQ ARRFEKNYLL YGTGLQEAHE HLEVADAILT NNTATIEKIL
GREHYRTMST LVAAYHEQLV LLGRAGNETA QERIVPDLRE FGGQMVAFAE DFVEKEQKSV
RRMFLLAKRV PLYFMSVVFV LMVFVTVFLT RQLVLTLNRF MEYTRRIGEG DFSPILPARK
YKDEFTKLAE AFNHMIKELD HKHKVLLESH KLRAIGTLVA GVAHELNNPL NNTLLTASML
TEDFATLSDQ EKLDMVNDVI SETERARRVV KNLLDFAREG ETQLAPLEMD KIVEDSARLV
ANQVRFAKVE LTVSCEPNLP RIHGDEQKLK QVFVNLILNA VDVLPPGGQI HVKVGKDKMP
GYVLVTVSDN GPGIPEHIQG RIFEPFFTTK GQGKGTGLGL SVSRGIIKKL GGYIHLTSSP
GQGTTFTVSL PTTESPSEIM SK