Gene Dole_2375 details

Gene Information

• Locus tag: Dole_2375
• Symbol: uvrC
• ID: 5695223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 2859650
• End bp: 2861530
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641264981
• Product: excinuclease ABC subunit C
• Protein accession: YP_001530256
• Protein GI: 158522386
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.467747
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAC AGGCAAAAAC AGATAACGAA CACGAGCTGC CCGAAGACCG GTTGGCAGAA 
AAACTGGCCG GTGCACCGGC CCGGCCCGGG GTTTATCTGA TGAAGGATGG GGCCGGCGCC 
ATCATCTACG TGGGCAAGGC CTTTAATCTG AAAAAGCGGC TGGCCTCCTA TTTTGTCAAA 
AAAGAGCGGC TCGACCTCAA GACCGGGCTG CTGATGGAGC GCGTAGTTGA TTTTGACACC 
ATTGTCACGG CCACGGAAAA CGAGGCCCTG ATTCTGGAAG CATCCCTGAT CCGGCGTCAC 
AAGCCCCGGT ACAACGTGCT GTTAAAGGAC GACAAGCGGT ACCCGTCGCT CCGCATCGAC 
CCCCGGCAGC CCTATCCGGC CCTGGAGATC GTGCGCAAGA CCCGGCCCGA CGGGGCCGTT 
TACTTCGGCC CCTTTTCATC GGCCCGGGCC GTGCGGGAAA CGTTGAAGGT GGTGGATAAA 
ACCTTTCGGC TGCGCAAGTG CCGGGGCAAA GTTTTTAAAA AAAGGTCGCG GCCCTGCATT 
AACTTCCAGA TGGGGCTCTG CCTGGGACCC TGTTTTTACG ACGTGCCGGA AAACGATTAT 
GCCGAGGCGG TGCGGGAGGT CTCCCTGTTT CTCAAGGGCC GGGCCACGGA ACTGGTGAGC 
GATCTTCGGG TTCGGATGAA GGGGGCCGCG GAGAACCAGG AATTTGAAAA AGCGGCCCTG 
CTGCGGGACC GGCTTTTTGC CATTGAAAAG GTGATTGAAA AGCAGGTGGT GGTAACCCCT 
GATTTCGCGG ACCGGGACGT GATCGCCGTG GCCGAGGAGG GCCGGCGCTC CGTGGTGGCC 
CTCCTCCAGG TACGAAAGGG GGTGCTTTCC GGCACCCGGT TTTTTCACTT CGAGGAGCTG 
CTGTCCTCCG TGGCTGACAG TCTGGCCACC TTTATGGTGC AGTATTACAC CGAGCCGGGC 
CGGGTGCCGG ACGAGATTCT CACCGATGGC ACCCCGTTCG GCGGGCCGTG GATCGCCGAC 
CATCTGCGGG ACCTGGCGGA AAAACGGGTG AACATGGCTG TTCCCCGAAG AGGGGAAAAG 
TTTCTGCTGA TAAAGATGGC CCGGGAGAAC GCGCAAAACG AACTGGCCGC CGCCGCCCTG 
GGAGCGCGGA AGCACCAGAA GACACTGGAG CGGCTGGCCC GCAAGCTGGG CCTTTCCGAT 
GTGCCGGCCC GGATCGCGTG CGTGGACAAC TCCCATCTTG CCGGCACCGG CACCGTGGCC 
GCGGTGGTGG TCTTTGCCGA CGGCGTTCCC GATCCGTCGG CCTACCGGCG CTACCGGCTG 
GCCGGTGTGC CGGCGGCGGA CGACTACGCG GCCATGAAGC AGGTGCTGGT GCGGCGGTTT 
GCCGCCGGCG CCGATGACGC CGGCCCGGTG GACCTGCTGC TGGTGGACGG GGGCAGGGGG 
CAGCTGAACA TTGCCGCGGC CGTACTTCAG GAGGCCGGCC TGGCCGGAAA GATGGGCGTG 
GCCGCCATTT CAAAAAAGGA CGAGGCAAAA GAGGAGACGG CAGACAAGGT CTATGTGCCG 
GGACGGCGCA ACCCGGTCAA CCTTGGCCCG GCCGACCCGG CTCTGTTTCT GCTGGAAGAG 
ATTCGGGACG AGGCCCACCG GTTTGCCATT GACTACCAGC GAAAGGAGCG GAAGCGCATC 
TCCCTGCGCT CCGCCCTGGA CGACATTCCC GGCATCGGGC CGCAGCGCAA AAGAATGCTG 
CTGGACCGGT TCGGAACGGT CGAAGGCGTT CGCGCCGCAT CGGTGGAAGA CCTTGCCGCA 
CTGCCGGGAA TTACCGGGTC CATGGCCGGG CAGATCAGGG AACACCTGAG GGCTCAAGGA 
TTCAAGGGGT CGAGGGGTTG A 

 

Protein sequence

MKTQAKTDNE HELPEDRLAE KLAGAPARPG VYLMKDGAGA IIYVGKAFNL KKRLASYFVK 
KERLDLKTGL LMERVVDFDT IVTATENEAL ILEASLIRRH KPRYNVLLKD DKRYPSLRID 
PRQPYPALEI VRKTRPDGAV YFGPFSSARA VRETLKVVDK TFRLRKCRGK VFKKRSRPCI 
NFQMGLCLGP CFYDVPENDY AEAVREVSLF LKGRATELVS DLRVRMKGAA ENQEFEKAAL 
LRDRLFAIEK VIEKQVVVTP DFADRDVIAV AEEGRRSVVA LLQVRKGVLS GTRFFHFEEL 
LSSVADSLAT FMVQYYTEPG RVPDEILTDG TPFGGPWIAD HLRDLAEKRV NMAVPRRGEK 
FLLIKMAREN AQNELAAAAL GARKHQKTLE RLARKLGLSD VPARIACVDN SHLAGTGTVA 
AVVVFADGVP DPSAYRRYRL AGVPAADDYA AMKQVLVRRF AAGADDAGPV DLLLVDGGRG 
QLNIAAAVLQ EAGLAGKMGV AAISKKDEAK EETADKVYVP GRRNPVNLGP ADPALFLLEE 
IRDEAHRFAI DYQRKERKRI SLRSALDDIP GIGPQRKRML LDRFGTVEGV RAASVEDLAA 
LPGITGSMAG QIREHLRAQG FKGSRG