| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2329 |
|---|
| Symbol | |
|---|
| ID | 5695177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2812885 |
|---|
| End bp | 2813631 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264935 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001530210 |
|---|
| Protein GI | 158522340 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000636938 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTTCAC ATCGTTTTTT GTTGTACAAC ATTCGATACG GAACGGGCAG TGGGGGATGG
CGGTTTCACG CGCCGGTGCC CTTCAGCGGA TATTTCCGCA AAACCCAAAA GGCGTTTCCG
GAGATCGCGT CCTTTATCCG CTCCTGCGAT CCCGACATGG TGGGCCTGGT GGAGGTGGAC
GGTGGTTCCG GCCGGCACAA CGGCATCAAC CAGGCCCGGC AGGTGGCCGA GGAACTGGGC
TATCACTGCG TTTTTCAGAC CAAGTACAAG CCCTCCCCGT TTTCCAGGGC CATTCCCATC
ATGGGCAAGC AGGGCAATGC CGTGCTGGCC CGGCATGACA TTCTCGGGCA CCGGTACCAC
TATTTTGAAA AAGGGATCAA GCGGCTGATC ATCGAGGTGG AACTGGAAGA CGTGGTCCTG
TTCCTGGTGC ATCTCTCCCT TCATCCCGGC CACCGGCAGC AGCAGCTTGC CGAGCTGGGC
CTGCTGATAC GGGGGGTGGG CAAACCGGTG ATTGTGGGCG GCGACTTCAA CGCCTTTGCC
GGGTCGCGGG AACTGGCCGG CTTTCTTTCC GCCACCGGCC TGGTCAGCGC CAATGCCGCC
AATGTGCGGA CGTTTCCCAG CAAGCGGCCC CGGTGGGAGC TGGACTATAT TTTTCACAGC
CGGCAGGTGA GGGTGAACGA CATGCACGCG CCCTCCGTCC GATTTTCCGA CCATCTGCCC
CTGGTGTGTG ATTTTACCAT AAAATAA
|
|---|
| Protein sequence | MASHRFLLYN IRYGTGSGGW RFHAPVPFSG YFRKTQKAFP EIASFIRSCD PDMVGLVEVD
GGSGRHNGIN QARQVAEELG YHCVFQTKYK PSPFSRAIPI MGKQGNAVLA RHDILGHRYH
YFEKGIKRLI IEVELEDVVL FLVHLSLHPG HRQQQLAELG LLIRGVGKPV IVGGDFNAFA
GSRELAGFLS ATGLVSANAA NVRTFPSKRP RWELDYIFHS RQVRVNDMHA PSVRFSDHLP
LVCDFTIK
|
|---|
| |