| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2315 |
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| Symbol | |
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| ID | 5695163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2801764 |
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| End bp | 2803140 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641264921 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001530196 |
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| Protein GI | 158522326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCC AGCCAAAAAA CTATCACCGA CAGGCGGAAG ATACCGTCGC TTTAAAAGGA
AAACCCCGGT GGTTGAAGGC AGTGGCATCA GAGTCCAGGC AGACCAGCGA GGCGCTGCGC
AAGAGCGAAT TGCTGATGCG CGCGATCAAC GTGTCGGCAC GGGATGCCGT TCTCATGATG
GATGCCGAAG GGCGGGTTTC CTACTGGAAT CCCGCGGCTG AACGAATCCT TGGTTACACC
AGCGATGAGG CACTGGGGCG GAATCTGCAT TCCCTGCTTG CCCCTCAGCA TTATCGAAGG
TTGTTTGAGG CGGCGTTCCC GGAGTTCCAG CGTTCAGGTT GCGGCAATAA CGTTGAAAAA
ACCATGCGGT TAAAAGCCCT GCGAAAAAAC GGAGACGAAT TTCCTGTAGA ACTGTCCCTT
GCCGGCGTGC AGCTCCATGA CGGATGGCAT GCGGTTGGTA TTATACGTGA CATCTCCAAT
CGTGAGCTGT CGGATAAGGC CTTGCGGGAG AGCGAAGACA AATTCAGAAC CTATATGGAA
AAAGCGCCTC TTGGCATATT CGTGGCGGAT CACACGGGCC GTTGCCTTGA AGCCAACCAG
GCGGCATGCC GGATGAGCGG ATACACGGAA GAAGAGCTTT TGGAATTAAG CCTTCAGGAT
TTTCTCGCTC CGGATTTTTC AGGCGTGGGG ATGGCCTCGT TTAAAAAGTT AAAAACAGAG
GGCCGCGTAG ACGGTGATCT TATGGTACGC GGGAAGAATG GAAAGAATTT CTGGATTAAT
CTGGTTGCAA CAACAATTGG GCCTGACAGA GTGCTTGCTT ATTGTCAGGA TATCACCAGG
CGCAAGCAGA CCGAAGAGGA AATCCAGAAA ATGGCCTACC ATGACGCCCT GACCGGTCTT
CCCAACCGGA AGCTCTTCTC CGATCGTCTG GGTATTGCAT TGGCCCAGGC CCGGAGGGAC
CAAAAGGGTA TCGCGGCCAT CATACTTGAT CTCGATAATT TCAAGGACGT GAACGATACC
TTTGGCCATG ATGTGGGAGA TCGTCTTCTC CAGGCAGCGG CAGAGCGGTT AAGCGCTGCA
CTGAGAAAAA GTGATACGGT TGCGCGCCTG GGTGGCGACG AGTTTGTGCT GATTCTTCCC
GACTTAAAGG GGACAGAAGA CGTGGACCGG GTTGCACAGA AAATCGTTGA CGGTTTTCGA
AACCCCTTTT CCATCGACAC CCATCAACTC ATCGTGACAA CGAGTATCGG CATCGCCGTC
TACCCCCGGG ATGGCATCTC TGAGGTTCTC CTTCTGAAGC ATGCCGATAT CGCCATGTAT
CAGGTCAAAC AGGCAGGACG GAATGGATAC CGCTTCTTTA ACCCGAACAG CTCATGA
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| Protein sequence | MTGQPKNYHR QAEDTVALKG KPRWLKAVAS ESRQTSEALR KSELLMRAIN VSARDAVLMM
DAEGRVSYWN PAAERILGYT SDEALGRNLH SLLAPQHYRR LFEAAFPEFQ RSGCGNNVEK
TMRLKALRKN GDEFPVELSL AGVQLHDGWH AVGIIRDISN RELSDKALRE SEDKFRTYME
KAPLGIFVAD HTGRCLEANQ AACRMSGYTE EELLELSLQD FLAPDFSGVG MASFKKLKTE
GRVDGDLMVR GKNGKNFWIN LVATTIGPDR VLAYCQDITR RKQTEEEIQK MAYHDALTGL
PNRKLFSDRL GIALAQARRD QKGIAAIILD LDNFKDVNDT FGHDVGDRLL QAAAERLSAA
LRKSDTVARL GGDEFVLILP DLKGTEDVDR VAQKIVDGFR NPFSIDTHQL IVTTSIGIAV
YPRDGISEVL LLKHADIAMY QVKQAGRNGY RFFNPNSS
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