Gene Dole_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2258 
Symbol 
ID5695106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2734386 
End bp2735972 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content61% 
IMG OID641264864 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001530139 
Protein GI158522269 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATG ACGCAGCATC CGGGTCTGTT GCCGCGGTTG ATATAAACGG CACCATCGGC 
GGCATCGTGG GTTCGCTGGT ACTGGCCGAG CCCGAGGCCG ACCTGCGGGA CGCCCTTGAG
ATACACCTCA CCCGACTGGG CCTGCATGTA CACAAGGCGG GCAACGGGCA GGCGGCCCTG
AACCTTCTCA AGGAGCAAGG ACCCTCTTTT CTGCTGGCCA ACGCCAGGCT GCCGGACATG
AGCGGCATCG ACCTGCTTCG CCTGAGCCAG GCGGTCTCCC CGAACACCGC CGTGATCATC
ATGGGAGACC CCGCGGACCG GAAATCCGCC CTGGCCGCCC TTCGGCTCAA GGCCACCGAC
TATATTCACA TTCCGGTGGA AAGCGAGCAC CTGGAAGTGG CCCTGACGCG GGCCGCTCAC
TGGCGGACCA CGCGCGTCAA GATTCAGCAC TACGTGGAGC AGCTGGAGGC CCTGCACCAG
ACCAAGGTGC TCTTTCAACA GCTGTTTGAT GAAGTCCCCT GTTATATCTC GATTCAGGAC
AAGCATTTTC GTCTCACCGG CGCCAACCGA CGTTTCAAGG AGGATTTCGG CGACACCATC
GGTTCCATCT GCTACGAGGT CTATAAACAC CGCAGCGAGC CGTGCCGGGA CTGCCCGGTG
ATGGGCACCT TTGAGGACGG CCAGCCCCGG CAGACCGAAG AGGTGGTCAC CAGCAAATCC
GGCGAAAAGA TCAATGTGCT GACCTGGACC GCGCCCATTC ATGACGCCGC GGGCCAGATC
ACCCAGGTGA TGGAGATGGC CACCGACATC ACCCAGATTC GCAAACTGCA GAGCCGGCTG
ACATCCATCG GCCTGCTGAT GAGCTCAATC TCCCACAGCA TCAAGGGGCT TCTCACAGCC
CTGGACGGCG CCATCTACCG GCTGGATTCA GGCCTTGAAA AGCAGGACAT GGACAGGGTG
CGCGACGGCG CCGACCGGGT CAAGGAGATG GTGGCCCAGA TTCGCAAGAT GGTGCTCAAT
GTGCTTTACT ACACCAAGGA GCGCCAGCTG AACTGGGCAC GCATCAATGT ACGGGACTTT
ACCCGGGACG TGGTCTCCAT CATCGGGCCC AAGGCGGAGG CCGCCGGCGT GACCTTTACG
CACAACCTGA GCAGCGGCCT GGGGGCCTTT GAGGTGGACC CCGGCGCCCT GCGCTCGGCC
CTGATCAACA TTCTTGAAAA CTGCATCGAC GCCTGTGTGG ATGACAAAAG CGGCAACGAC
AGGAAGCATG AGGTGACCCT GAAGGTGACG GACCGGGACG ACCATGTCGT GTATGAAATC
CAGGATAACG GCGTGGGCAT GGACCAGGAG ACCCGGGAAA AGATGTTTAC CCTCTTTTTC
TCCTCCAAGG GAAGCCGGGG CACCGGCCTG GGCATGTTCG TGGCCGACCA GATCATCGGC
CAGCACGGCG GCAGCATTGA TGTGGACTCG GAACCCGGCA GCGGGTCGAC CTTTACGGTG
CGCCTGCCCA GGATCCTGCC CCAGGAGATT CGCCAGCCGG CCGATGCGGA TACCGGCGAA
CCGGACCATG CCTCCCATAC AGAATAG
 
Protein sequence
MQNDAASGSV AAVDINGTIG GIVGSLVLAE PEADLRDALE IHLTRLGLHV HKAGNGQAAL 
NLLKEQGPSF LLANARLPDM SGIDLLRLSQ AVSPNTAVII MGDPADRKSA LAALRLKATD
YIHIPVESEH LEVALTRAAH WRTTRVKIQH YVEQLEALHQ TKVLFQQLFD EVPCYISIQD
KHFRLTGANR RFKEDFGDTI GSICYEVYKH RSEPCRDCPV MGTFEDGQPR QTEEVVTSKS
GEKINVLTWT APIHDAAGQI TQVMEMATDI TQIRKLQSRL TSIGLLMSSI SHSIKGLLTA
LDGAIYRLDS GLEKQDMDRV RDGADRVKEM VAQIRKMVLN VLYYTKERQL NWARINVRDF
TRDVVSIIGP KAEAAGVTFT HNLSSGLGAF EVDPGALRSA LINILENCID ACVDDKSGND
RKHEVTLKVT DRDDHVVYEI QDNGVGMDQE TREKMFTLFF SSKGSRGTGL GMFVADQIIG
QHGGSIDVDS EPGSGSTFTV RLPRILPQEI RQPADADTGE PDHASHTE