| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2231 |
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| Symbol | |
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| ID | 5695078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2702455 |
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| End bp | 2703861 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264836 |
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| Product | sun protein |
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| Protein accession | YP_001530112 |
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| Protein GI | 158522242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAAAT TCCATCGACC CGCTGACAAC AGGCGGCCGA CAGCGGCCAG GAAATCCGAC
CCCCGGGCTG TTGCCCTTCG CATACTCACT GCCCTTGAAA AGGGCCACCG CACCCTGGAC
CAGGTGGCCG ATGAGGCGCT GGCCAGGGTG TCGTTTCCGG AAAAGCGGGA CCGGGCCCTT
GTCACTACCC TGGTGTACGG TGTTTTGCGG TGGCGCAACA CCCTGGATTA CACCATCGTC
CATTTTTCCA GGACCCCGCT GCAGCGCATG GATCCGGCGG TGCTGAATAT TCTGCGGCTC
GGTCTGTTTC AGCTGCGGTT TCTGGACAGA ATTCCCGATT TTGCCGCCAT CAACAGTTCA
GTAGATCTGT CGAAACAGGC CGGGCTTGGC CGGCTGTCCG GATTTGTAAA CGGCCTGCTG
CGAAGCTCGA CCCGGCATCC CGGTGAGCCG GATCCGCCCG ATATGGACAA AGACCCGGTG
CAGGCCCTTT GCGTGACAAA ATCGTTTCCC GAATGGATGA TCCGGCGATG GATCGCCCGC
TTCGGTATCG AAGAGACGGT GCAACTATGT GATTTTTTGA ATACGGTGCC GCCCATCACG
GTGCGGGTCA ACGGACTGCG GGCAGCCCCG GAACAGGTGG CCGCCTCCCT TGCCCAGGAG
GCGGCGGGCG TGACACCGGG CCGGCACGCG CCCGAGGCCG TGAGTTTTTC CTCTCCAAAA
GTGCCGGTGC ATGAGATGAC GGCCTTTGGC GCGGGATGGT TCCAGGTACA GGACGAGGCG
GCCCAGCTGA TCGGCCTTTT GACCGATCCC CGGCCCGGTC AGCGGGTGCT GGACGCCTGC
GCCGGCCTGG GCGGAAAGAC CGGCCATCTG GCCCGGCTCA TGGAAAACCA GGGCCGGATC
GTGGCGGCGG ACCGGGACAC GGCAAAGCTG GAGCGGCTTG CCGGTGAGAT GACGCGGCTG
GGCATCACCA ATGTGCGGCC CATGACCCTG GATATGCTGG TCCCGGAACA GTTGAAGGAC
GCAGGCGGGT TTGACCGCGT GCTGGCCGAC TGTCCCTGTT CCGGCACCGG GGTAATTCGC
CGCAATCCGG ACACCAAGTG GCGTCTTTCC GAACAGGACC TGGCGCGGCT GCAGAACGAC
CAGATCGCCA TGCTGACCAA CCTGGCCGAT CATGTGCGTG ACGGCGGGCT TTTGGTCTAT
GCCGTCTGCA GCATGGAGCC CGAGGAAAAC GACGCCGTGG TGCAGTCCTT TTTGAAGAGG
CGGCCCGATT TTGCTATAGA TACAGGCGTG GCGGCCGATG TTCCGGCGGT GGCCGGGTTT
ACAGACGACC CGGGCTTTTT CCGGACATTT CCCTGGCGCC ACGGCATGGA CGGATTTTTT
GGTGTGCGCC TGAAAAAAAA TGGTTAA
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| Protein sequence | MRKFHRPADN RRPTAARKSD PRAVALRILT ALEKGHRTLD QVADEALARV SFPEKRDRAL
VTTLVYGVLR WRNTLDYTIV HFSRTPLQRM DPAVLNILRL GLFQLRFLDR IPDFAAINSS
VDLSKQAGLG RLSGFVNGLL RSSTRHPGEP DPPDMDKDPV QALCVTKSFP EWMIRRWIAR
FGIEETVQLC DFLNTVPPIT VRVNGLRAAP EQVAASLAQE AAGVTPGRHA PEAVSFSSPK
VPVHEMTAFG AGWFQVQDEA AQLIGLLTDP RPGQRVLDAC AGLGGKTGHL ARLMENQGRI
VAADRDTAKL ERLAGEMTRL GITNVRPMTL DMLVPEQLKD AGGFDRVLAD CPCSGTGVIR
RNPDTKWRLS EQDLARLQND QIAMLTNLAD HVRDGGLLVY AVCSMEPEEN DAVVQSFLKR
RPDFAIDTGV AADVPAVAGF TDDPGFFRTF PWRHGMDGFF GVRLKKNG
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