| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2229 |
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| Symbol | |
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| ID | 5695076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2700789 |
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| End bp | 2701448 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264834 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001530110 |
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| Protein GI | 158522240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.561803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTGA TTGCGCCGTC GATACTGTCG GCTGATTTTG CCCGGCTGGG CGATGAGGTG
ATGGCGGTTG AGGCGGCCGG CGCCGACTGG ATTCACGTGG ATGTGATGGA CGGCCGGTAT
GTGCCCAACA TCACCATCGG CCCGCTGGTG GTCAAGGCGG TCCGGAGTGT CACCAGCCTG
CCGGTGGATG CCCACCTGAT GATCATGGAG CCGGAACGCT ACGTGGCGGA ATTCGTTCAG
GCCGGGGCCG ACCTGGTGGC CGTTCACGCC GAGGCCAGTG TCCACCTGAA CCGCACTATT
CAGTTGATCA AGGGGCTGGG TGCCAGGGCC GGCGTGGCCT TAAACCCCTC CACGCCGTTG
AGCGTCCTGG ACTGGGTGCT GGACGACCTG GACCTGGTGG TGATCATGAG CGTGAATCCC
GGCTTCGGGG GCCAGCAGTT TATACCCAAT TCCCTGGACA AGGTCCGGGC ACTCAAGCAG
CGCATCACCG AGCGGGGGCT GGCCACCCAG ATTCAGGTGG ATGGCGGGGT AAACGAAAAA
ACCATCAGGG ACGTATCCGC GGCCGGTACC GACGTGTTTG TGGCCGGGTC GGCCGTGTTC
GGCAGCAGCA ATTACAAAAC CACCATCGCC ACGCTTCGCA AGCTGGCAAA TGAGGCATAG
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| Protein sequence | MKLIAPSILS ADFARLGDEV MAVEAAGADW IHVDVMDGRY VPNITIGPLV VKAVRSVTSL
PVDAHLMIME PERYVAEFVQ AGADLVAVHA EASVHLNRTI QLIKGLGARA GVALNPSTPL
SVLDWVLDDL DLVVIMSVNP GFGGQQFIPN SLDKVRALKQ RITERGLATQ IQVDGGVNEK
TIRDVSAAGT DVFVAGSAVF GSSNYKTTIA TLRKLANEA
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